Job Description P39304 Confidence 96.63% Date Thu Jan 5 11:59:08 GMT 2012 Rank 239 Aligned Residues 184 % Identity 14% Template d1suxa_ SCOP info TIM beta/alpha-barrel Triosephosphate isomerase (TIM) Triosephosphate isomerase (TIM) Resolution 2.00

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.							.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.
Query Sequence		N	Q	T	M	D	S	A	Y	E	T	T	R	L	I	A	E	E	V	D	I	I	E	V	G	T	I	L	C	V	G	E	G	V	R	A	V	R	D	L	K	A	L	Y	P	H	K	I	V	L	A	D	A	K	I	A	D	.	.	.	.	.	.	A	G	K	I	L	S	R	M	C	F	E	A	N	A	D	W	V	T
Query Conservation																																																										.	.	.	.	.	.
Alig confidence																				.	.																																					.	.	.	.	.	.
Template Conservation																				.	.
Template Sequence		N	G	S	E	S	L	L	V	P	L	I	E	T	L	N	A	A	T	.	.	F	D	H	D	V	Q	C	V	V	A	P	T	F	L	H	I	P	M	T	K	A	R	L	T	N	P	K	F	Q	I	A	A	Q	N	A	I	T	R	S	G	A	F	T	G	E	V	S	L	Q	I	L	K	D	Y	G	I	S	W	V	V
Template Known Secondary structure																				.	.		S	S										G	G	G											T	T						S			B	S			S	S		T	T			B							T	T
Template Predicted Secondary structure																				.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		86	.	.	.								90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.														.	.	.	.	.	.	.	130	.	.						.	.	.	.	.	.	.	140
Predicted Secondary structure						.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.
Query Sequence		V	I	C	C	.	.	.	.	.	.	.	A	D	I	N	T	A	K	G	A	L	D	V	A	K	E	F	N	G	D	V	Q	I	E	L	T	G	Y	W	T	W	E	Q	A	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	Q	W	R	D	A	G	I	G	Q	.	.	.	.	.	V	V	Y	H	R	S	R	D
Query Conservation						.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.																							.											.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.
Template Conservation																																			.
Template Sequence		L	G	H	S	E	R	R	L	Y	Y	G	E	T	N	E	I	V	A	E	K	V	A	Q	A	C	A	A	G	F	H	V	I	V	.	C	V	G	E	T	N	E	E	R	E	A	G	R	T	A	A	V	V	L	T	Q	L	A	A	V	A	Q	K	L	S	K	E	A	W	S	R	V	V	I	A	Y	E	P	V	W	A
Template Known Secondary structure			S								S																	T	T						.											T	T															T	T			T	G	G	G	G	G								G	G	G
Template Predicted Secondary structure																																			.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.												.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.																						.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.																						.
Query Sequence		A	Q	A	A	G	V	A	W	G	E	A	D	I	T	A	I	K	R	L	S	D	M	.	.	.	.	.	.	.	.	.	.	.	G	F	K	V	T	V	T	G	G	L	A	L	E	D	L	P	L	F	K	G	I	.	P	I	H	V	F	I	A	G	R	S	I	R	D	A	A
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.																						.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation
Template Sequence		I	G	T	G	K	V	A	T	P	Q	Q	A	Q	E	V	H	E	L	L	R	R	W	V	R	S	K	L	G	T	D	I	A	A	Q	L	R	I	L	Y	G	G	S	V	T	A	K	N	A	R	T	L	Y	Q	M	R	D	I	N	G	F	L	V	G	G	A	S	L	K	P	E
Template Known Secondary structure		S	S	S	S																																					S	S											T	S	T	T							S	G	G	G	G	S	T	T
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions