Job Description P39304 Confidence 96.86% Date Thu Jan 5 11:59:08 GMT 2012 Rank 227 Aligned Residues 196 % Identity 10% Template d1rbla1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 2.20

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		14	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.											40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.				.	.	.	.	.	.	.
Predicted Secondary structure														.															.	.	.	.	.	.	.	.	.	.																																		.	.	.
Query SS confidence														.															.	.	.	.	.	.	.	.	.	.																																		.	.	.
Query Sequence		T	M	D	S	A	Y	E	T	T	R	L	I	.	A	E	E	V	D	I	I	E	V	G	T	I	L	C	.	.	.	.	.	.	.	.	.	.	V	G	E	G	V	R	A	V	R	D	L	K	A	L	Y	P	H	K	I	V	L	A	D	A	K	I	A	D	A	G	K	I	L	.	.	.	S	R	M	C	F	E	A
Query Conservation														.															.	.	.	.	.	.	.	.	.	.																																		.	.	.
Alig confidence														.															.	.	.	.	.	.	.	.	.	.																																		.	.	.
Template Conservation
Template Sequence		S	A	K	N	Y	G	R	A	V	Y	E	C	L	R	G	G	L	D	F	T	K	D	D	E	N	I	N	S	Q	P	F	Q	R	W	R	D	R	F	L	F	V	A	D	A	I	H	K	S	Q	A	E	T	G	E	I	K	G	H	Y	L	N	V	T	A	P	T	C	E	E	M	M	K	R	A	E	F	A	K	E	L
Template Known Secondary structure																T	T		S						T	T		S	S	B	T	T	B																					S	S											S	S														T
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		80	.	.	.	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120											.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure													.																															.	.	.	.	.	.	.	.	.	.								.
Query SS confidence													.																															.	.	.	.	.	.	.	.	.	.								.
Query Sequence		N	A	D	W	V	T	V	I	C	C	A	.	D	I	N	T	A	K	G	A	L	D	V	A	K	E	F	N	G	D	V	Q	I	E	L	T	G	Y	W	T	W	E	.	.	.	.	.	.	.	.	.	.	Q	A	Q	Q	W	R	D	.	A	G	I	G	Q	V	V	Y	H	R	S	R	D	A	Q	A	A	G	V	A
Query Conservation													.																															.	.	.	.	.	.	.	.	.	.								.
Alig confidence													.																															.	.	.	.	.	.	.	.	.	.								.							.	.	.
Template Conservation																																																																				.	.	.
Template Sequence		G	M	P	I	I	M	H	D	F	L	T	A	G	F	T	A	N	T	T	L	A	K	W	C	R	D	N	G	V	L	L	H	I	H	R	A	M	H	A	V	I	D	R	Q	R	N	H	G	I	H	F	R	V	L	A	K	C	L	R	L	S	G	G	D	H	L	.	.	.	H	S	G	T	V	V	G	K	L	E	G
Template Known Secondary structure		T		S																									T								T	T						S		S	S	S	S																S			.	.	.					S	S	S	S	S
Template Predicted Secondary structure																																																																				.	.	.
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.				.	.	.	330	.	.	.	.	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.																					.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190		.	.	.	.	.	.		.	.	.	200	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.								.							.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.								.							.
Query Sequence		W	G	E	A	D	I	T	A	I	K	R	L	S	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	G	F	K	V	T	V	T	G	G	L	A	L	E	D	L	P	L	F	K	G	I	.	P	I	H	V	F	I	A	.	G	R	S	I	R	D	.	A	A	S	P	V	E	A	A
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.								.							.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.								.							.
Template Conservation
Template Sequence		D	K	A	S	T	L	G	F	V	D	L	M	R	E	D	H	I	E	A	D	R	S	R	G	V	F	F	T	Q	D	W	A	S	M	P	G	V	L	P	V	A	S	G	G	I	H	V	W	H	M	P	A	L	V	E	I	F	G	D	D	S	V	L	Q	F	G	G	G	T	L	G	H	P	W	G	N	A	P	G	A
Template Known Secondary structure																S					B	G	G	G	T	B		S					T	T										S	S			G	G	G										S	S						S					T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
		205	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	F	K	R	S	I	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	A	N	R	V	A	L	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		418	.	420	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions