Job Description P39304 Confidence 96.62% Date Thu Jan 5 11:59:08 GMT 2012 Rank 241 Aligned Residues 178 % Identity 16% Template d1neya_ SCOP info TIM beta/alpha-barrel Triosephosphate isomerase (TIM) Triosephosphate isomerase (TIM) Resolution 1.20

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.				.	.	.	.	.	.	.	.	70	.	.					.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																																				.	.	.												.	.	.	.
Query SS confidence																																																				.	.	.												.	.	.	.
Query Sequence		N	Q	T	M	D	S	A	Y	E	T	T	R	L	I	A	E	E	V	D	I	I	E	V	G	T	I	L	C	V	G	E	G	V	R	A	V	R	D	L	K	A	L	Y	P	H	K	I	V	L	A	.	.	.	D	A	K	I	A	D	A	G	K	I	L	.	.	.	.	S	R	M	C	F	E	A	N	A	D	W	V
Query Conservation																																																				.	.	.												.	.	.	.
Alig confidence																				.	.																															.	.	.												.	.	.	.
Template Conservation																				.	.
Template Sequence		N	G	S	K	Q	S	I	K	E	I	V	E	R	L	N	T	A	S	.	.	I	P	E	N	V	E	V	V	I	C	P	P	A	T	Y	L	D	Y	S	V	S	L	V	K	K	P	Q	V	T	V	G	A	Q	N	A	Y	L	K	A	S	G	A	F	T	G	E	N	S	V	D	Q	I	K	D	V	G	A	K	Y	V
Template Known Secondary structure																		S		.	.			T	T									G	G	G											T	T						S				S	S	S	S	S	S		T	T										T	T
Template Predicted Secondary structure																				.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.			.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		85	.	.	.	.								90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.																	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure							.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	V	I	C	C	.	.	.	.	.	.	.	A	D	I	N	T	A	K	G	A	L	D	V	A	K	E	F	N	G	D	V	Q	I	E	L	T	G	Y	W	T	W	E	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	Q	Q	W	R	D	A	G	I	G	Q	V	V	Y	H	R	S	R	D	A
Query Conservation							.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.																							.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation																																				.																																										.
Template Sequence		I	L	G	H	S	E	R	R	S	Y	F	H	E	D	D	K	F	I	A	D	K	T	K	F	A	L	G	Q	G	V	G	V	I	L	.	C	I	G	E	T	L	E	E	K	K	A	G	K	T	L	D	V	V	E	R	Q	L	N	A	V	L	E	E	V	K	D	F	T	N	V	V	V	A	Y	E	P	.	V	A	I
Template Known Secondary structure				S							T	T																	T	T						.											T	T																					T	T								.			T
Template Predicted Secondary structure																																				.																																										.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.		.	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160												.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.																								.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.																								.
Query Sequence		Q	A	A	G	V	A	W	G	E	A	D	I	T	A	I	K	R	L	S	.	.	.	.	.	.	.	.	.	.	.	D	M	G	F	K	V	T	V	T	G	G	L	A	L	E	D	L	P	L	F	K	G	I	.	P	I	H	V	F	I	A	G	R	S
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.																								.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.																								.
Template Conservation
Template Sequence		G	T	G	L	A	A	T	P	E	D	A	Q	D	I	H	A	S	I	R	K	F	L	A	S	K	L	G	D	K	A	A	S	E	L	R	I	L	Y	G	G	S	A	N	G	S	N	A	V	T	F	K	D	K	A	D	V	D	G	F	L	V	G	G	A
Template Known Secondary structure		T	T	S																																					S	S			T	T	T	G	G	G	G	T	T		T	T							S	G	G
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions