Job Description P39304 Confidence 96.93% Date Thu Jan 5 11:59:08 GMT 2012 Rank 222 Aligned Residues 194 % Identity 14% Template d1n55a_ SCOP info TIM beta/alpha-barrel Triosephosphate isomerase (TIM) Triosephosphate isomerase (TIM) Resolution 0.83

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		2	.	.	.	.	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.							.	.	70	.	.	.	.
Predicted Secondary structure												.																																																									.	.	.	.	.	.
Query SS confidence												.																																																									.	.	.	.	.	.
Query Sequence		S	L	P	M	L	Q	V	A	L	D	.	N	Q	T	M	D	S	A	Y	E	T	T	R	L	I	A	E	E	V	D	I	I	E	V	G	T	I	L	C	V	G	E	G	V	R	A	V	R	D	L	K	A	L	Y	P	H	K	I	V	L	A	D	A	K	I	A	D	.	.	.	.	.	.	A	G	K	I	L	S	R
Query Conservation												.																																																									.	.	.	.	.	.
Alig confidence												.																				.	.																																				.	.	.	.	.	.
Template Conservation																																.	.
Template Sequence		P	Q	P	I	A	A	A	N	W	K	C	N	G	T	T	A	S	I	E	K	L	V	Q	V	F	N	E	H	T	I	.	.	S	H	D	V	Q	C	V	V	A	P	T	F	V	H	I	P	L	V	Q	A	K	L	R	N	P	K	Y	V	I	S	A	Q	N	A	I	A	K	S	G	A	F	T	G	E	V	S	M	P
Template Known Secondary structure												S																	S			.	.		S										G	G	G											T	T						S			B	S	S		S	S		T	T			B
Template Predicted Secondary structure																																.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		75	.	.	.	.	80	.	.	.	.	.	.	.								.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.														.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure															.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Query SS confidence															.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Query Sequence		M	C	F	E	A	N	A	D	W	V	T	V	I	.	.	.	.	.	.	.	C	C	A	D	I	N	T	A	K	G	A	L	D	V	A	K	E	F	N	G	D	V	Q	I	E	L	T	G	Y	W	T	W	E	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	A	Q	Q	W	R	D	A	G	I	G	.	.	.
Query Conservation															.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Alig confidence															.	.	.	.	.	.	.																									.										.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Template Conservation																																														.
Template Sequence		I	L	K	D	I	G	V	H	W	V	I	L	G	H	S	E	R	R	T	Y	Y	G	E	T	D	E	I	V	A	Q	K	V	S	E	A	C	K	Q	G	F	M	V	I	A	.	C	I	G	E	T	L	Q	Q	R	E	A	N	Q	T	A	K	V	V	L	S	Q	T	S	A	I	A	A	K	L	T	K	D	A	W	N
Template Known Secondary structure							T							S								S																	T	T						.											T	T															T	T			G	G	G	G	G
Template Predicted Secondary structure																																														.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
				132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.												.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure		.	.																																.	.	.	.	.	.	.	.	.	.	.																						.
Query SS confidence		.	.																																.	.	.	.	.	.	.	.	.	.	.																						.
Query Sequence		.	.	Q	V	V	Y	H	R	S	R	D	A	Q	A	A	G	V	A	W	G	E	A	D	I	T	A	I	K	R	L	S	D	M	.	.	.	.	.	.	.	.	.	.	.	G	F	K	V	T	V	T	G	G	L	A	L	E	D	L	P	L	F	K	G	I	.	P	I	H	V	F	I	A	G	R	S	I	R	D	A
Query Conservation		.	.																																.	.	.	.	.	.	.	.	.	.	.																						.
Alig confidence		.	.																																.	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation
Template Sequence		Q	V	V	L	A	Y	E	P	V	W	A	I	G	T	G	K	V	A	T	P	E	Q	A	Q	E	V	H	L	L	L	R	K	W	V	S	E	N	I	G	T	D	V	A	A	K	L	R	I	L	Y	G	G	S	V	N	A	A	N	A	A	T	L	Y	A	K	P	D	I	N	G	F	L	V	G	G	A	S	L	K	P
Template Known Secondary structure		G								G	G	G	S	S	S	S																							T														S	S			T	T	T						T	S	T	T							S	G	G	G	G	S	T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		198
Predicted Secondary structure
Query SS confidence
Query Sequence		A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		241

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions