Job Description P39304 Confidence 95.65% Date Thu Jan 5 11:59:08 GMT 2012 Rank 274 Aligned Residues 141 % Identity 16% Template d1m6ja_ SCOP info TIM beta/alpha-barrel Triosephosphate isomerase (TIM) Triosephosphate isomerase (TIM) Resolution 1.50

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		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.								.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	D	A	G	K	I	L	S	R	M	C	F	E	A	N	A	D	W	V	T	V	.	.	.	.	.	.	.	I	C	C	A	D	I	N	T	A	K	G	A	L	D	V	A	K	E	F	N	G	D	V	Q	I	E	L	T	G	Y	W	T	W	E	Q	A	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																							.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.																										.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																							.
Template Sequence		A	Y	T	G	E	V	H	V	G	M	L	V	D	C	Q	V	P	Y	V	I	L	G	H	S	E	R	R	Q	I	F	H	E	S	N	E	Q	V	A	E	K	V	K	V	A	I	D	A	G	L	K	V	I	A	.	C	I	G	E	T	E	A	Q	R	I	A	N	Q	T	E	E	V	V	A	A	Q	L	K	A	I	N
Template Known Secondary structure		S		T	T			B							T	T							S								S																		T						.											T	T
Template Predicted Secondary structure																																																							.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
					124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.												.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.
Predicted Secondary structure		.	.	.																																							.	.	.	.	.	.	.	.	.	.	.																						.
Query SS confidence		.	.	.																																							.	.	.	.	.	.	.	.	.	.	.																						.
Query Sequence		.	.	.	Q	W	R	D	A	G	I	G	Q	V	V	Y	H	R	S	R	D	A	Q	A	A	G	V	A	W	G	E	A	D	I	T	A	I	K	R	L	S	D	.	.	.	.	.	.	.	.	.	.	.	M	G	F	K	V	T	V	T	G	G	L	A	L	E	D	L	P	L	F	K	G	.	I	P	I	H	V	F
Query Conservation		.	.	.																																							.	.	.	.	.	.	.	.	.	.	.																						.
Alig confidence		.	.	.																																							.	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation
Template Sequence		N	A	I	S	K	E	A	W	K	N	I	I	L	A	Y	E	P	V	W	A	I	G	T	G	K	T	A	T	P	D	Q	A	Q	E	V	H	Q	Y	I	R	K	W	M	T	E	N	I	S	K	E	V	A	E	A	T	R	I	Q	Y	G	G	S	V	N	P	A	N	C	N	E	L	A	K	K	A	D	I	D	G	F
Template Known Secondary structure				S		T	G	G	G	G	G								G	G	G	S	S	S	S																							T								S						S				T	T	T						T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	G	R	S	I	R	D	A	A	S	P	V	E	A	A	R	Q	F	K	R	S	I	A	E	L
Query Conservation
Alig confidence										.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.
Template Sequence		L	V	G	G	A	S	L	D	.	.	.	.	.	.	.	A	A	K	F	K	T	I	I	N	S	V
Template Known Secondary structure				S	G	G	G	G	S	.	.	.	.	.	.	.									G	G	G
Template Predicted Secondary structure										.	.	.	.	.	.	.
Template SS confidence
		239	240	.	.	.	.	.	.								.	.	.	250	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions