Job Description P39304 Confidence 99.31% Date Thu Jan 5 11:59:08 GMT 2012 Rank 80 Aligned Residues 199 % Identity 13% Template d1ka9f_ SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Histidine biosynthesis enzymes Resolution 2.30

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		1	.	.	.	.	.	.	.	.	10	.																		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.						.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.
Query Sequence		M	S	L	P	M	L	Q	V	A	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	Q	T	M	D	S	A	Y	E	T	T	R	L	I	A	E	E	V	D	I	I	E	V	.	.	.	.	.	G	T	I	L	C	V	G	E	G	V	R	A	V	R	D	L	K	A	L	Y	P	H	K	I
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.
Alig confidence					.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.									.	.	.	.	.									.												.
Template Conservation					.																																						.	.																						.												.
Template Sequence		L	A	K	.	R	I	V	P	C	L	D	V	H	A	G	R	V	V	K	G	V	N	F	V	N	L	R	D	A	G	D	P	V	E	A	A	R	A	Y	D	E	.	.	A	G	A	D	E	L	V	F	L	D	I	S	A	T	H	E	E	R	A	I	L	.	L	D	V	V	A	R	V	A	E	R	V	.	F	I	P
Template Known Secondary structure				B	.										T	T			T	T				S	S			S	S	T	T												.	.		T		S									S	S	T	T						.									T	T		.		S
Template Predicted Secondary structure					.																																						.	.																						.												.
Template SS confidence
		3	.	.		.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.			.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.		.	.	.
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.																					.	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	L	A	D	A	K	I	A	D	A	G	K	I	L	S	R	M	C	F	E	A	N	A	D	W	V	T	V	I	C	C	A	D	I	N	T	A	K	G	A	L	D	V	A	K	E	F	N	G	D	V	Q	I	E	L	T	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	T
Query Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.																							.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.																							.
Template Sequence		L	T	V	G	G	G	V	R	S	L	E	D	.	.	A	R	K	L	L	L	S	G	A	D	K	V	S	V	N	S	A	A	V	R	R	P	.	E	L	I	R	E	L	A	D	H	F	G	A	Q	A	V	V	L	A	I	D	A	R	W	R	G	D	F	P	E	V	H	V	A	G	G	R	V	P	T	G	L	H	A
Template Known Secondary structure						S	S			S				.	.								T		S												T	.												G	G	G											T	T							T	T	T	T
Template Predicted Secondary structure														.	.																							.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.			90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.
Query SS confidence																																																								.
Query Sequence		W	E	Q	A	Q	Q	W	R	D	A	G	I	G	Q	V	V	Y	H	R	S	R	D	A	Q	A	A	G	V	A	W	G	E	A	D	I	T	A	I	K	R	L	S	D	M	G	F	K	V	T	V	T	G	G	L	.	A	L	E	D	L	P	L	F	K	G	I	P	I	H	V	F	I	A	G	R	S	I	R	D	A
Query Conservation																																																								.
Alig confidence																				.																										.	.									.
Template Conservation																				.																										.	.
Template Sequence		V	E	W	A	V	K	G	V	E	L	G	A	G	E	I	L	L	T	.	S	M	D	R	D	G	T	K	E	G	Y	D	L	R	L	T	R	M	V	A	E	A	V	G	V	.	.	P	V	I	A	S	G	G	A	G	R	M	E	H	F	L	E	A	F	Q	A	G	A	E	A	A	L	A	A	S	V	F	H	F	G
Template Known Secondary structure												T								.		T	T	T	T	T	T		S															S	S	.	.						S				S										T	T		S					S					T	T
Template Predicted Secondary structure																				.																										.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.			.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		198	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	P	V	E	A	A	R	Q	F	K	R	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	I	P	I	P	K	L	K	R	Y	L	A	E
Template Known Secondary structure		S	S
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions