Job Description P39304 Confidence 98.30% Date Thu Jan 5 11:59:08 GMT 2012 Rank 138 Aligned Residues 214 % Identity 11% Template d1juba_ SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 1.40

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.																		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.											.	.	.	.	.	50	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.
Query Sequence		M	S	L	P	M	L	Q	V	A	L	D	N	Q	T	M	D	S	A	Y	E	T	T	R	L	I	A	E	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	I	I	E	V	G	T	I	L	C	V	G	E	G	V	.	.	.	.	.	.	.	.	.	.	R	A	V	R	D	L	K	A	L
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	A	N	P	F	M	N	A	S	G	V	H	C	M	T	I	E	D	L	E	E	L	K	A	S	Q	A	G	A	Y	I	T	K	S	S	T	L	E	K	R	E	G	N	P	L	P	R	Y	V	D	L	E	L	G	S	I	N	S	M	G	L	P	N	L	G	F	D	Y	Y	L	D	Y	V	L	K	N	Q	K	E	N
Template Known Secondary structure			S	S	S					T	T	S	S		S	S										S	S		S			B				B		S	S		B			S		S							T	T										B	S																T
Template Predicted Secondary structure
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.			.	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.	.	90	.												.	.	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.									.												.	.	.	.	.	.	.	.	.	.	.															.
Query SS confidence																					.	.									.												.	.	.	.	.	.	.	.	.	.	.															.
Query Sequence		Y	P	H	K	I	V	L	A	D	A	K	I	A	D	A	G	K	I	L	.	.	S	R	M	C	F	E	A	N	.	A	D	W	V	T	V	I	C	C	A	D	.	.	.	.	.	.	.	.	.	.	.	I	N	T	A	K	G	A	L	D	V	A	K	E	F	.	N	G	D	V	Q	I	E	L	T	G	Y	W	T
Query Conservation																					.	.									.												.	.	.	.	.	.	.	.	.	.	.															.
Alig confidence																					.	.									.												.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation
Template Sequence		A	Q	E	G	P	I	F	F	S	I	A	G	M	S	A	A	E	N	I	A	M	L	K	K	I	Q	E	S	D	F	S	G	I	T	E	L	N	L	S	C	P	N	V	P	G	E	P	Q	L	A	Y	D	F	E	A	T	E	K	L	L	K	E	V	F	T	F	F	T	K	P	L	G	V	K	L	P	P	Y	F	D
Template Known Secondary structure			S	S	S									S	S														S				S						S					S	S	S				G	G	G													T	T	T			S											S
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		119	120	.					.	.	.	.	.	.	.	.	130	.	.	.	.	.	.																								.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure					.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	E	Q	.	.	.	.	A	Q	Q	W	R	D	A	G	I	G	Q	V	V	Y	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	S	R	D	A	Q	A	A	G	V	A	W	G	E	A	D	I	T	A	I	K	R	L	S	D	M	G	F	K	V	T	V	T	G	G
Query Conservation					.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	V	H	F	D	I	M	A	E	I	L	N	Q	F	P	L	T	Y	V	N	S	V	N	S	I	G	N	G	L	F	I	D	P	E	A	E	S	V	V	I	K	P	K	D	G	F	G	G	I	G	G	A	Y	I	K	P	T	A	L	A	N	V	R	A	F	Y	T	R	L	K	P	E	I	Q	I	I	G	T	G	G
Template Known Secondary structure													T	T	S																			T	T	T	T			S		S	G	G	G	G						S	G	G	G													T	T	S		T	T	S						S	S
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		172		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.			.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure			.																									.	.
Query SS confidence			.																									.	.
Query Sequence		L	.	A	L	E	D	L	P	L	F	K	G	I	P	I	H	V	F	I	A	G	R	S	I	R	D	.	.	A	A	S	P	V	E	A	A	R	Q	F	K	R	S	I	A	E	L
Query Conservation			.																									.	.
Alig confidence			.																									.	.
Template Conservation
Template Sequence		I	E	T	G	Q	D	A	F	E	H	L	L	C	G	A	T	M	L	Q	I	G	T	A	L	H	K	E	G	P	A	I	F	D	R	I	I	K	E	L	E	E	I	M	N	Q	K
Template Known Secondary structure				S											T		S													T
Template Predicted Secondary structure
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions