Job Description P39304 Confidence 99.78% Date Thu Jan 5 11:59:08 GMT 2012 Rank 46 Aligned Residues 191 % Identity 16% Template d1j5ta_ SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes Resolution 3.00

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.		.
Predicted Secondary structure																												.																																																				.
Query SS confidence																												.																																																				.
Query Sequence		D	N	Q	T	M	D	S	A	Y	E	T	T	R	L	I	A	E	E	V	D	I	I	E	V	G	T	.	I	L	C	V	G	E	G	V	R	A	V	R	D	L	K	A	L	Y	P	H	K	I	V	L	A	D	A	K	I	A	D	A	G	K	I	L	S	R	M	C	F	E	A	N	A	D	W	V	T	V	I	.	C
Query Conservation																												.																																																				.
Alig confidence																												.																											.	.	.																							.
Template Conservation																																																							.	.	.
Template Sequence		D	I	N	A	D	A	S	L	E	D	F	I	R	M	Y	D	E	L	A	D	A	I	S	I	L	T	E	K	H	Y	F	K	G	D	P	A	F	V	R	A	A	R	N	L	T	C	R	P	I	L	A	K	D	.	.	.	F	Y	I	D	T	V	Q	V	K	L	A	S	S	V	G	A	D	A	I	L	I	I	A	R
Template Known Secondary structure					T	T											T	T	T		S									T	T	T																S						S	.	.	.				S										T	T		S						G	G
Template Predicted Secondary structure																																																							.	.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.				.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	A	D	I	N	T	A	K	G	A	L	D	V	A	K	E	F	N	G	D	V	Q	I	E	L	T	G	Y	W	T	W	E	Q	A	Q	Q	W	R	D	A	G	I	G	Q	V	V	Y	H	R	S	R	D	A	Q	A	A	G	V	A	W	G	E	A	D	I	T	A	I	K	R	L	S	D	M	G	F	K	V	T	V
Query Conservation
Alig confidence																											.	.	.																																.	.
Template Conservation																											.	.	.																																.	.
Template Sequence		I	L	T	A	E	Q	I	K	E	I	Y	E	A	A	E	E	L	G	M	D	S	L	V	E	V	.	.	.	H	S	R	E	D	L	E	K	V	F	S	V	I	R	P	K	I	I	G	I	N	T	R	D	L	D	T	F	E	I	K	.	.	K	N	V	L	W	E	L	L	P	L	V	P	D	D	T	V	V	V	A
Template Known Secondary structure		G	S														T	T	T								.	.	.	S	S														S								S								.	.								G	G	G	S		T	T	S
Template Predicted Secondary structure																											.	.	.																																.	.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.				.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.			.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	G	L	A	L	E	D	L	P	L	F	K	G	I	P	I	H	V	F	I	A	G	R	S	I	R	D	A	A	S	P	V	E	A	A	R	Q	F	K	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	S	G	I	K	D	P	R	E	L	K	D	L	R	G	K	V	N	A	V	L	V	G	T	S	I	M	K	A	E	N	P	R	R	F	L	E	E	M	R	A
Template Known Secondary structure			S			S	S	G	G	G					T	T	T		S					S					T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions