Job Description P39304 Confidence 99.93% Date Thu Jan 5 11:59:08 GMT 2012 Rank 39 Aligned Residues 206 % Identity 15% Template d1geqa_ SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes Resolution 2.00

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		2	.	.	.	.	.			.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.			40	.	.	.	.																					.	.	.	.	.	50	.	.	.	.	.	.	.
Predicted Secondary structure								.	.																																	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.																																	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	L	P	M	L	Q	.	.	V	A	L	D	N	Q	T	M	D	S	A	Y	E	T	T	R	L	I	A	E	E	V	D	I	I	E	V	G	T	I	L	C	.	.	V	G	E	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	V	R	D	L	K	A	L	Y	P	H	K
Query Conservation								.	.																																	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.																																	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation																																																																														.
Template Sequence		K	D	G	S	L	I	P	Y	L	T	A	G	D	P	D	K	Q	S	T	L	N	F	L	L	A	L	D	E	Y	A	G	A	I	E	L	G	I	P	F	S	D	P	I	A	D	G	K	T	I	Q	E	S	H	Y	R	A	L	K	N	G	F	K	L	R	E	A	F	W	I	V	K	E	F	R	R	H	.	S	S	T
Template Known Secondary structure			T	T								T	T	S	S													G	G	G	B	S									S			T	T	S														T	T															T	T	.
Template Predicted Secondary structure																																																																														.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.
		58	.	60	.	.	.	.	.	.	.					.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure												.	.	.	.
Query SS confidence												.	.	.	.
Query Sequence		I	V	L	A	D	A	K	I	A	D	.	.	.	.	A	G	K	I	L	S	R	M	C	F	E	A	N	A	D	W	V	T	V	I	C	C	A	D	I	N	T	A	K	G	A	L	D	V	A	K	E	F	N	G	D	V	Q	I	E	L	T	G	Y	W	T	W	E	Q	A	Q	Q	W	R	D	A	G	I	G	Q	V
Query Conservation												.	.	.	.
Alig confidence												.	.	.	.																												.
Template Conservation																																											.
Template Sequence		P	I	V	L	M	T	Y	Y	N	P	I	Y	R	A	G	V	R	N	F	L	A	E	A	K	A	S	G	V	D	G	I	L	V	V	D	L	P	V	F	H	A	.	K	E	F	T	E	I	A	R	E	E	G	I	K	T	V	F	L	A	A	P	N	T	P	D	E	R	L	K	V	I	D	D	M	T	T	G	F	V
Template Known Secondary structure																												T							T	T			G	G	G		.											T									T	T														S	S
Template Predicted Secondary structure																																											.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.			.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.												.																									.	.
Query SS confidence																														.												.																									.	.
Query Sequence		V	Y	H	R	S	R	D	A	Q	A	A	G	V	A	W	G	E	A	D	I	T	A	I	K	R	L	S	D	.	M	G	F	K	V	T	V	T	G	G	L	.	A	L	E	D	L	P	L	F	K	G	I	P	I	H	V	F	I	A	G	R	S	I	R	D	.	.	A	A	S	P	V	E	A	A	R	Q	F	K	R
Query Conservation																														.												.																									.	.
Alig confidence									.	.	.	.	.	.	.															.												.																									.	.
Template Conservation									.	.	.	.	.	.	.
Template Sequence		Y	L	V	S	L	Y	E	.	.	.	.	.	.	.	I	P	K	T	A	Y	D	L	L	R	R	A	K	R	I	C	R	N	K	V	A	V	G	F	G	V	S	K	R	E	H	V	V	S	L	L	K	E	G	A	N	G	V	V	V	G	S	A	L	V	K	I	I	G	E	K	G	R	E	A	T	E	F	L	K	K
Template Known Secondary structure									.	.	.	.	.	.	.																	S	S						S				S										T	T		S																G	G	G
Template Predicted Secondary structure									.	.	.	.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.								.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	A	E	L	W	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	V	E	E	L	L	G
Template Known Secondary structure								T
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions