|   |
13 | . | . | . | . | . | . | 20 | . | . | . | . | . | |
. | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | |
|
80 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  | . |
|
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
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| . |
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| . |
. |
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|
Query Sequence |   |
Q | T | M | D | S | A | Y | E | T | T | R | L | I | . |
A | E | E | V | D | I | I | E | V | G | T | I | L | C | V | G | E | G | V | R | A | V | R | D | L | K | A | L | Y | P | H | K | I | V | L | A | D | A | K | I | A | D | A | G | K | I | L | S | R | M | C | F | E | A | . |
. |
N | A | D | W | V | T | V | I | C | C |
Query Conservation |   |
  |   |   |
|   |   |
|   |   |   |   |   |   | . |   |   |   |
|
|   |
|
|
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   | . | . |
|
|
|   |
|   |
|   |   |   |
Alig confidence |   |
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|
| . |
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| . |
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| . | . | . | . |
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| . | . |
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| . |
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|
Template Conservation |   |
  |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|
|
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|
|   |   |   |
|   |   |   |   |   |   |
|
|   |   |
|   |   |   |   | . |   |
|
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|
|
|   |   | . | . | . | . |   |   |
|   |
|
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|
|   |   |   |   |
|   |   |
|
|
| . |
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|
|
Template Sequence |   |
R | D | P | A | P | V | Q | E | W | A | R | R | Q | E | E | G | G | A | R | A | L | D | L | N | V | G | D | K | V | S | A | M | E | W | L | V | E | V | T | Q | E | V | S | . |
N | L | T | L | C | L | D | S | T | N | . |
. |
. |
. |
I | K | A | I | E | A | G | L | K | K | C | K | N | R | A | M | I | N | . |
S | T | N |
Template Known Secondary structure |   |
T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  | B |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| . |
| S |  |  |  |  |  |
| S |
| . | . | . | . |  |  |  |  |  |  |  |  |  |  |
| S | S |
|  |  |  |  | . |  |  |
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|  |  |  |  |  |
|
|
| . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
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|  |  |  |  | . |  |
|
|
Template SS confidence |   |
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  |   |
22 | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | |
. | . | . | . | . | 70 | . | . | . | . | |
|
|
|
. | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | |
. | . | . |
  |
  |   |
90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | |
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120 | . | . | . | . | . | . | . | . | . | 130 | |
|
. | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
| . | . |
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
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| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
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| . |
. |
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|
Query Sequence |   |
A | D | I | N | T | A | K | G | A | L | D | V | A | K | E | F | N | G | D | V | Q | I | E | L | T | G | Y | W | T | W | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | Q | A | Q | Q | W | R | D | A | G | I | . |
. |
G | Q | V | V | Y | H | R | S | R | D | A | Q | A | A | G | V | A | W | G | E | A | D | I | T | A |
Query Conservation |   |
  |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
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|
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|
| . | . | . | . | . | . | . | . | . | . | . | . |
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| . | . |
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|
|
Template Conservation |   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |
|
|   |
|   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|
|   |   |
|   |
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
Template Sequence |   |
A | E | R | E | K | V | E | K | L | F | P | L | A | V | E | H | G | A | A | L | I | G | L | T | M | N | K | T | G | I | P | K | D | S | D | T | R | L | A | F | A | M | E | L | V | A | A | A | D | E | F | G | L | P | M | E | D | L | Y | I | D | P | L | I | L | P | A | N | V | A | Q | D | H | A | P | E | V | L | K | T |
Template Known Secondary structure |   |
S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  | S |
|
| S | S |
| S |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
| G | G | G |  |  |  |  |
|
|
|
|
| T | T | T |
| T | T |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
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|
  |   |
100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . |
  |
  |   |
156 | . | . | . | 160 | . | |
. | . | . | . | . | . | . | . | 170 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 |
Predicted Secondary structure |   |
 |  |  |  |
|
| . |
|
|
|
|  |  |  |
|
|
|
|
|  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
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|
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|
|
Query Sequence |   |
I | K | R | L | S | D | . |
M | G | F | K | V | T | V | T | G | G | L | A | L | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | L | P | L | F | K | G | I | P | I | H | V | F | I | A |
Query Conservation |   |
|
|   |   |   |   | . |   |   |   |   |
|   |
|   |
|
|
|   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |
|
|
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |
|   |   |   |   |   |
|   |
|   |
|   |
|
|   |
|
|
|   |
|   |
|   |   |
|   |   |   |   |
|   |   |
|   |   |   |
|
|
|
|
|
|
|
Template Sequence |   |
L | Q | Q | I | K | M | L | A | D | P | A | P | K | T | V | L | G | L | S | N | V | S | Q | N | C | Q | N | R | P | L | I | N | R | T | F | L | A | M | A | M | A | C | G | L | M | S | A | I | A |
Template Known Secondary structure |   |
 |  |  |  |  | T |
|
| S | S |
|
|  |  |  |  |  | G | G | G | G | G | T | T |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
  |   |
180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . |
  |