Return to main results Retrieve Phyre Job Id

Job DescriptionP39304
Confidence88.49%DateThu Jan 5 11:59:08 GMT 2012
Rank359Aligned Residues202
% Identity15%Templated1dosa_
SCOP infoTIM beta/alpha-barrel Aldolase Class II FBP aldolase
Resolution1.67

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50. ........
Predicted Secondary structure 












...........................



Query SS confidence 












































. . . . . . . . . . . . . . . . . . . . . . . . . . .







Query Sequence  QVALDNQTMDSAYETTRLIAEEVDIIEVGTILCVGEGVRAVRDLK. . . . . . . . . . . . . . . . . . . . . . . . . . . ALYPHKIV
Query Conservation   



    
  
         

 



       
   
  
 ...........................       
Alig confidence 




















......

















...........................







Template Conservation 
 



 
 
   


 



......  





 
                       
           
    


Template Sequence  LPAVNCVGTDSINAVLETAAK. . . . . . VKAPVIVQFSNGGASFIAGKGVKSDVPQGAAILGAISGAHHVHQMAEHYGVPV
Template Known Secondary structure 

S......T



TTS


STTT
Template Predicted Secondary structure 



......




















Template SS confidence 















































































   31........40.........50. ........60.........70.........80.........90.........100....
 
   60........ .70.........80.........90.. .......100.........110......
Predicted Secondary structure 


............







.....





......
Query SS confidence 








. . . . . . . . . . . .























. . . . .























. . . . . .
Query Sequence  LADAKIADA. . . . . . . . . . . . GKILSRMCFEANADWVTVICCADI. . . . . NTAKGALDVAKEFNGDVQIELTGY. . . . . .
Query Conservation    
 
  
 ............           


 
 
    
 .....
 
          
    
     ......
Alig confidence 








............























.....























......
Template Conservation 






           
    
    

  









 






  

 


 

  








 


 


Template Sequence  ILHTDHCAKKLLPWIDGLLDAGEKHFAATGKPLFSSHMIDLSEESLQENIEICSKYLERMSKIGMTLEIELGCTGGEEDG
Template Known Secondary structure 



GGGSS
S
S

TTS
TT










Template Predicted Secondary structure 

























Template SS confidence 















































































   105....110.........120.........130.........140.........150.........160.........170.........180....
 
   117..120.. .......130.........140.........150.........160 .......
Predicted Secondary structure  ............

.....













............




Query SS confidence  . . . . . . . . . . . .





. . . . .





































. . . . . . . . . . . .






Query Sequence  . . . . . . . . . . . . WTWEQA. . . . . QQWRDAGIGQVVYHRSRDAQAAGVAWGEADITAIKRLS. . . . . . . . . . . . DMGFKVT
Query Conservation  ............      .....                                 

   ............     
 
Alig confidence  ............





.....





































............






Template Conservation             

 



      

  



 






 

 

     
    
  
   
          





Template Sequence  VDNSHMDASALYTQPEDVDYAYTELSKISPRFTIAASFGNVHGVYKAGNVVLTPTILRDSQEYVSKKHNLPHNSLNFVFH
Template Known Secondary structure 
S








S

TT
S


SS


SS


S




TT

TT
S

Template Predicted Secondary structure 









































Template SS confidence 















































































   185....190.........200.........210.........220.........230.........240.........250.........260....
 
   168.170.........180.........190........ .200.........210....
Predicted Secondary structure 













.................................
Query SS confidence 






























. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .















Query Sequence  VTGGLALEDLPLFKGIPIHVFIAGRSIRDAA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . SPVEAARQFKRSIAEL
Query Conservation 
 


           


 






  
 .................................

   
      
 
 
Alig confidence 






























.................................















Template Conservation 




  
 
 


  

 



 


  
    

                       
   



  
     

   
Template Sequence  GGSGSTAQEIKDSVSYGVVKMNIDTDTQWATWEGVLNYYKANEAYLQGQLGNPKGEDQPNKKYYDPRVWLRAGQTSMIAR
Template Known Secondary structure  S
TT

TT
GGGSSSSTT

Template Predicted Secondary structure 


































Template SS confidence 















































































   265....270.........280.........290.........300.........310.........320.........330.........340....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions