Job Description P39304 Confidence 98.13% Date Thu Jan 5 11:59:08 GMT 2012 Rank 148 Aligned Residues 166 % Identity 14% Template d1d3ga_ SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 1.60

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		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.					.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80			.	.	.	.	.	.	.	.	.	90											.	.	.	.	.	.	.	.	.	100	.	.	.	.	.					.
Predicted Secondary structure																			.	.	.	.																		.	.											.	.	.	.	.	.	.	.	.	.																.	.	.	.
Query SS confidence																			.	.	.	.																		.	.											.	.	.	.	.	.	.	.	.	.																.	.	.	.
Query Sequence		V	R	D	L	K	A	L	Y	P	H	K	I	V	L	A	D	A	.	.	.	.	K	I	A	D	A	G	K	I	L	S	R	M	C	F	E	A	N	.	.	A	D	W	V	T	V	I	C	C	A	.	.	.	.	.	.	.	.	.	.	D	I	N	T	A	K	G	A	L	D	V	A	K	E	F	.	.	.	.	N
Query Conservation																			.	.	.	.																		.	.											.	.	.	.	.	.	.	.	.	.																.	.	.	.
Alig confidence																			.	.	.	.																		.	.											.	.	.	.	.	.	.	.	.	.																.	.	.	.
Template Conservation
Template Sequence		Q	K	Q	A	K	L	T	E	D	G	L	P	L	G	V	N	L	G	K	N	K	T	S	V	D	A	A	E	D	Y	A	E	G	V	R	V	L	G	P	L	A	D	Y	L	V	V	N	V	S	S	P	N	T	A	G	L	G	K	A	E	L	R	R	L	L	T	K	V	L	Q	E	R	D	G	L	R	R	V	H	R
Template Known Secondary structure										T	T											T	T		S														G	G	G		S						S			T	T	S	T	T																			T	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.					.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.												.	.	140	.	.	.	.	.	.	.	.	.	150							.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.
Query SS confidence																	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.
Query Sequence		G	D	V	Q	I	E	L	T	G	Y	W	T	W	E	Q	.	.	.	.	A	Q	Q	W	R	D	A	G	I	G	Q	V	V	Y	H	R	.	.	.	.	.	.	.	.	.	.	.	S	R	D	A	Q	A	A	G	V	A	W	G	E	.	.	.	.	.	.	A	D	I	T	A	I	K	R	L	S	D	M	G	F	K
Query Conservation																	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.
Alig confidence																	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.
Template Conservation
Template Sequence		P	A	V	L	V	K	I	A	P	D	L	T	S	Q	D	K	E	D	I	A	S	V	V	K	E	L	G	I	D	G	L	I	V	T	N	T	T	V	S	R	P	A	G	L	Q	G	A	L	R	S	E	T	G	G	L	S	G	K	P	L	R	D	L	S	T	Q	T	I	R	E	M	Y	A	L	T	Q	G	R	V	P
Template Known Secondary structure										S																		T										B	S				T	T				T	T	T	T	S	S	S					G	G	G															T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
		166	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		V	T	V	T	G	G	L	.	A	L	E	D	L	P	L	F	K	G	I	P	I	H	V	F	I	A	G	R	S	I	R	D	A	A	S	P	V	E	A	A	R	Q	F	K	R	S	I	A	E	L
Query Conservation									.
Alig confidence									.																											.	.
Template Conservation																																				.	.
Template Sequence		I	I	G	V	G	G	V	S	S	G	Q	D	A	L	E	K	I	R	A	G	A	S	L	V	Q	L	Y	T	A	L	T	F	W	G	.	.	P	P	V	V	G	K	V	K	R	E	L	E	A	L
Template Known Secondary structure						S	S			S											T		S					S								.	.	T
Template Predicted Secondary structure																																				.	.
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.			.	.	.	.	.	.	370	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions