Job Description P39304 Confidence 96.29% Date Thu Jan 5 11:59:08 GMT 2012 Rank 254 Aligned Residues 180 % Identity 15% Template d1b9ba_ SCOP info TIM beta/alpha-barrel Triosephosphate isomerase (TIM) Triosephosphate isomerase (TIM) Resolution 2.85

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.				.	.	.	.	.	.					.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																																				.	.	.							.	.	.	.
Query SS confidence																																																				.	.	.							.	.	.	.
Query Sequence		N	Q	T	M	D	S	A	Y	E	T	T	R	L	I	A	E	E	V	D	I	I	E	V	G	T	I	L	C	V	G	E	G	V	R	A	V	R	D	L	K	A	L	Y	P	H	K	I	V	L	A	.	.	.	D	A	K	I	A	D	.	.	.	.	A	G	K	I	L	S	R	M	C	F	E	A	N	A	D	W	V
Query Conservation																																																				.	.	.							.	.	.	.
Alig confidence																								.																												.	.	.							.	.	.	.
Template Conservation																								.
Template Sequence		H	K	T	I	S	E	A	K	K	F	V	S	L	L	V	N	E	L	H	D	V	K	.	E	F	E	I	V	V	C	P	P	F	T	A	L	S	E	V	G	E	I	L	S	G	R	N	I	K	L	G	A	Q	N	V	F	Y	E	D	Q	G	A	F	T	G	E	I	S	P	L	M	L	Q	E	I	G	V	E	Y	V
Template Known Secondary structure																			T	S	S			.	S	S								G	G	G									T	T	S	S	S					S				S	S	S	S	S	S		T	T									T	T	T
Template Predicted Secondary structure																								.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		85	.	.	.	.								90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.																			.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	V	I	C	C	.	.	.	.	.	.	.	A	D	I	N	T	A	K	G	A	L	D	V	A	K	E	F	N	G	D	V	Q	I	E	L	T	G	Y	W	T	W	E	Q	A	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	W	R	D	A	G	I	G	Q	V	V	Y	H	R	S	R
Query Conservation							.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.																							.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.
Template Sequence		I	V	G	H	S	E	R	R	R	I	F	K	E	D	D	E	F	I	N	R	K	V	K	A	V	L	E	K	G	M	T	P	I	L	.	C	V	G	E	T	L	E	E	R	E	K	G	L	T	F	C	V	V	E	K	Q	V	R	E	G	F	Y	G	L	D	K	E	E	A	K	R	V	V	I	A	Y	E	P	V	W
Template Known Secondary structure				S							T	S																	T	T						.												T															T	T							T	T								G	G
Template Predicted Secondary structure																																				.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.												.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.																						.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.																						.
Query Sequence		D	A	Q	A	A	G	V	A	W	G	E	A	D	I	T	A	I	K	R	L	S	D	M	.	.	.	.	.	.	.	.	.	.	.	G	F	K	V	T	V	T	G	G	L	A	L	E	D	L	P	L	F	K	G	I	.	P	I	H	V	F	I	A	G	R	S
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.																						.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation
Template Sequence		A	I	G	T	G	R	V	A	T	P	Q	Q	A	Q	E	V	H	A	F	I	R	K	L	L	S	E	M	Y	D	E	E	T	A	G	S	I	R	I	L	Y	G	G	S	I	K	P	D	N	F	L	G	L	I	V	Q	K	D	I	D	G	G	L	V	G	G	A
Template Known Secondary structure		G	S	S	S	S																							S								S						S	S							T	T	T	S	S	S	T	T							S	G	G
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions