Job Description P39304 Confidence 97.18% Date Thu Jan 5 11:59:08 GMT 2012 Rank 209 Aligned Residues 208 % Identity 14% Template d1aw1a_ SCOP info TIM beta/alpha-barrel Triosephosphate isomerase (TIM) Triosephosphate isomerase (TIM) Resolution 2.70

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		2	.	.	.	.	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.				.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.					.	.	70	.	.
Predicted Secondary structure												.															.	.	.																																					.							.	.	.	.
Query SS confidence												.															.	.	.																																					.							.	.	.	.
Query Sequence		S	L	P	M	L	Q	V	A	L	D	.	N	Q	T	M	D	S	A	Y	E	T	T	R	L	I	.	.	.	A	E	E	V	D	I	I	E	V	G	T	I	L	C	V	G	E	G	V	R	A	V	R	D	L	K	A	L	Y	P	H	K	I	V	L	A	.	D	A	K	I	A	D	.	.	.	.	A	G	K	I	L
Query Conservation												.															.	.	.																																					.							.	.	.	.
Alig confidence												.															.	.	.																																					.							.	.	.	.
Template Conservation
Template Sequence		R	H	P	V	V	M	G	N	W	K	L	N	G	S	K	E	M	V	V	D	L	L	N	G	L	N	A	E	L	E	G	V	T	G	V	D	V	A	V	A	P	P	A	L	F	V	D	L	A	E	R	T	L	T	E	A	G	S	A	I	I	L	G	A	Q	N	T	D	L	N	N	S	G	A	F	T	G	D	M	S
Template Known Secondary structure												S																		T	T	T			S	S								G	G	G												T								S				S		S	S	S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.								90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.																			.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	R	M	C	F	E	A	N	A	D	W	V	T	V	I	C	C	.	.	.	.	.	.	.	A	D	I	N	T	A	K	G	A	L	D	V	A	K	E	F	N	G	D	V	Q	I	E	L	T	G	Y	W	T	W	E	Q	A	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	W	R	D
Query Conservation																			.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.																							.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.
Template Sequence		P	A	M	L	K	E	F	G	A	T	H	I	I	I	G	H	S	E	R	R	E	Y	H	A	E	S	D	E	F	V	A	K	K	F	A	F	L	K	E	N	G	L	T	P	V	L	.	C	I	G	E	S	D	A	Q	N	E	A	G	E	T	M	A	V	C	A	R	Q	L	D	A	V	I	N	T	Q	G	V	E	A
Template Known Secondary structure						G	G	G	T							S								S																		T						.											T	T																			G	G	G
Template Predicted Secondary structure																																																.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.											.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.																					.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.																					.
Query Sequence		A	G	I	G	Q	V	V	Y	H	R	S	R	D	A	Q	A	A	G	V	A	W	G	E	A	D	I	T	A	I	K	R	L	S	D	M	.	.	.	.	.	.	.	.	.	.	G	F	K	V	T	V	T	G	G	L	A	L	E	D	L	P	L	F	K	G	.	I	P	I	H	V	F	I	A	G	R	S	I	R	D
Query Conservation																																					.	.	.	.	.	.	.	.	.	.																					.
Alig confidence																																					.	.	.	.	.	.	.	.	.	.																					.
Template Conservation
Template Sequence		L	E	G	A	I	I	A	Y	E	P	I	W	A	I	G	T	G	K	A	A	T	A	E	D	A	Q	R	I	H	A	Q	I	R	A	H	I	A	E	K	S	E	A	V	A	K	N	V	V	I	Q	Y	G	G	S	V	K	P	E	N	A	A	A	Y	F	A	Q	P	D	I	D	G	A	L	V	G	G	A	A	L	D
Template Known Secondary structure		G	T	T								G	G	G	T	T	T	S																					T	T														S				T	T	T						T	S	T	T							S	G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		197	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	S	P	V	E	A	A	R	Q	F	K	R	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	K	S	F	A	A	I	A	K	A	A	A	E	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions