Job Description P39304 Confidence 72.45% Date Thu Jan 5 11:59:08 GMT 2012 Rank 472 Aligned Residues 195 % Identity 13% Template c9rubB_ PDB info PDB header:lyase(carbon-carbon) Chain: B: PDB Molecule:ribulose-1,5-bisphosphate carboxylase; PDBTitle: crystal structure of activated ribulose-1,5-bisphosphate2 carboxylase complexed with its substrate, ribulose-1,5-3 bisphosphate Resolution 2.60 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.											40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.				.	.	.	.	.	.	.	80
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.																																		.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.																																		.	.	.
Query Sequence		T	M	D	S	A	Y	E	T	T	R	L	I	A	E	E	V	D	I	I	E	V	G	T	I	L	C	.	.	.	.	.	.	.	.	.	.	V	G	E	G	V	R	A	V	R	D	L	K	A	L	Y	P	H	K	I	V	L	A	D	A	K	I	A	D	A	G	K	I	L	.	.	.	S	R	M	C	F	E	A	N
Query Conservation																												.	.	.	.	.	.	.	.	.	.																																		.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.																																		.	.	.
Template Conservation
Template Sequence		R	P	K	P	F	A	E	A	C	H	A	F	W	L	G	G	D	F	I	K	N	D	E	P	Q	G	N	Q	P	F	A	P	L	R	D	T	I	A	L	V	A	D	A	M	R	R	A	Q	D	E	T	G	E	A	K	L	F	S	A	N	I	T	A	D	D	P	F	E	I	I	A	R	G	E	Y	V	L	E	T	F
Template Known Secondary structure															T	T		S						T	T		S		B	T	T	B																					S	S											S	S															S
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		81	.						.	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.														.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure				.	.	.	.	.									.																											.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.									.																											.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	D	.	.	.	.	.	W	V	T	V	I	C	C	A	.	D	I	N	T	A	K	G	A	L	D	V	A	K	E	F	N	G	D	V	Q	I	E	L	T	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	W	T	W	E	Q	A	Q	Q	W	R	D	A	G	I	G	Q	V	V	Y	H	R	S	R	D	A
Query Conservation				.	.	.	.	.									.																											.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.									.																.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.
Template Sequence		G	E	N	A	S	H	V	A	L	L	V	D	G	Y	V	A	G	A	A	A	I	T	T	A	R	R	R	F	P	D	N	.	.	.	.	F	L	H	Y	H	R	A	G	H	G	A	V	T	S	P	Q	S	K	R	G	Y	T	A	F	V	H	C	K	M	A	R	L	Q	G	A	S	G	I	H	T	G	T	M	G	F
Template Known Secondary structure		G	G	G	G	G	G								S	S	S													S	S	S	.	.	.	.								T					S	S	S	S			S															T		S								S	S
Template Predicted Secondary structure																																	.	.	.	.
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.					.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.														.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.		.	.	.	.		190	.	.	.	.	.	.	.	.	.		200	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.																							.			.					.											.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.																							.			.					.											.
Query Sequence		Q	A	A	G	V	A	W	G	E	A	D	I	T	A	I	K	R	L	S	D	.	.	.	.	.	.	.	.	.	.	.	.	.	M	G	F	K	V	T	V	T	G	G	L	A	L	E	D	L	P	L	F	K	G	I	.	P	I	.	H	V	F	I	.	A	G	R	S	I	R	D	A	A	S	.	P	V	E	A	A
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.																							.			.					.											.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.																							.			.					.											.
Template Conservation
Template Sequence		G	K	M	E	G	E	S	S	D	R	A	I	A	Y	M	L	T	Q	D	E	A	Q	G	P	F	Y	R	Q	S	W	G	G	M	K	A	C	T	P	I	I	S	G	G	M	N	A	L	R	M	P	G	F	F	E	N	L	G	N	A	N	V	I	L	T	A	G	G	G	A	F	G	H	I	D	G	P	V	A	G	A
Template Known Secondary structure				S	S				S											S					S	S						T	T										S				T	T	T								S		S			S					S	T	T	T	T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
		205	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	F	K	R	S	I	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	S	L	R	Q	A	W	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		408	.	410	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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