Job Description P39304 Confidence 96.44% Date Thu Jan 5 11:59:08 GMT 2012 Rank 250 Aligned Residues 186 % Identity 18% Template c3tr9A_ PDB info PDB header:transferase Chain: A: PDB Molecule:dihydropteroate synthase; PDBTitle: structure of a dihydropteroate synthase (folp) in complex with pteroic2 acid from coxiella burnetii Resolution 1.90 Å

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		14	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.								.	.	.	.	40	.	.	.	.					.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure														.											.	.	.	.	.	.	.										.	.	.	.
Query SS confidence														.											.	.	.	.	.	.	.										.	.	.	.
Query Sequence		T	M	D	S	A	Y	E	T	T	R	L	I	.	A	E	E	V	D	I	I	E	V	G	.	.	.	.	.	.	.	T	I	L	C	V	G	E	G	V	.	.	.	.	R	A	V	R	D	L	K	A	L	Y	P	H	K	I	V	L	A	D	A	K	I	A	D	A	G	K	I	L	S	R	M	C	F	E	A	N	A
Query Conservation														.											.	.	.	.	.	.	.										.	.	.	.
Alig confidence														.											.	.	.	.	.	.	.										.	.	.	.												.										.	.	.	.
Template Conservation																																																								.										.	.	.	.
Template Sequence		D	L	N	S	A	L	R	T	A	E	K	X	V	D	E	G	A	D	I	L	D	I	G	G	E	A	T	N	P	F	V	S	P	S	T	Q	I	E	L	D	R	L	L	P	V	I	D	A	I	K	K	R	F	P	.	Q	L	I	S	V	D	T	S	R	.	.	.	.	P	R	V	X	R	E	A	V	N	T	G	A
Template Known Secondary structure		S														T	T		S									S		T	T																									.	S							S		.	.	.	.											T
Template Predicted Secondary structure																																																								.										.	.	.	.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.					110	.	.	.	.	.	.	.	.	.	120	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.																				.	120	.	.	.	.	.	.	.	.	.	130	.	.			.	.	.	.	.	.	.	140
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Query Sequence		D	W	V	T	V	I	C	C	A	D	I	N	T	A	K	G	A	L	D	V	A	K	E	F	N	G	D	V	Q	I	E	L	T	G	Y	W	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	E	Q	A	Q	Q	W	R	D	A	G	I	G	Q	.	.	V	V	Y	H	R	S	R	D
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Alig confidence			.	.											.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template Conservation			.	.											.
Template Sequence		D	.	.	X	I	N	D	Q	R	A	L	Q	L	.	D	D	A	L	T	T	V	S	A	L	K	T	P	V	C	L	X	H	F	P	S	E	T	R	K	P	G	S	T	T	H	F	Y	F	L	Q	S	V	K	K	E	L	Q	E	S	I	Q	R	C	K	K	A	G	I	S	E	D	R	I	I	I	D	P	G	F	G
Template Known Secondary structure			.	.					T	T	T	T		S	.	T	T									T											T	T			T	T	S	S																							T	T			G	G	G
Template Predicted Secondary structure			.	.											.
Template SS confidence
		127			.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		141			.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.											170	.	.	.	.	.	.									.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure			.	.																													.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.
Query SS confidence			.	.																													.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.
Query Sequence		A	.	.	Q	A	A	G	V	A	W	G	E	A	D	I	T	A	I	K	R	L	S	D	M	G	F	K	V	T	V	T	.	.	.	.	.	.	.	.	.	.	G	G	L	A	L	E	D	.	.	.	.	.	.	.	.	L	P	L	F	K	G	I	P	I	H	V	F	I	A	G	R	S	I	R	D	A	A	S	P
Query Conservation			.	.																													.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.
Alig confidence			.	.																													.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.													.	.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.	.
Template Sequence		Q	G	N	Y	G	K	N	V	S	E	N	F	Y	L	L	N	K	L	P	E	F	V	A	X	G	L	P	V	L	S	G	W	S	R	K	S	X	I	G	D	V	L	N	Q	P	P	E	N	R	L	F	G	S	I	A	A	D	V	L	A	V	Y	H	G	A	S	I	I	.	.	.	.	.	.	.	R	T	H	D	V
Template Known Secondary structure		S	G	G	G													T	T					T	T	S	S		B					T	T									T			G	G	G															T	T		S			.	.	.	.	.	.	.			S
Template Predicted Secondary structure																																																																						.	.	.	.	.	.	.
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.								.	.	.	.	.
		201	.	.	.	.	.	.	.			.	210	.	.	.	.
Predicted Secondary structure										.	.
Query SS confidence										.	.
Query Sequence		V	E	A	A	R	Q	F	K	.	.	R	S	I	A	E	L
Query Conservation										.	.
Alig confidence										.	.
Template Conservation
Template Sequence		K	A	T	R	E	A	I	K	I	A	T	Y	T	R	S	V
Template Known Secondary structure																	T
Template Predicted Secondary structure
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions