Job Description P39304 Confidence 93.00% Date Thu Jan 5 11:59:08 GMT 2012 Rank 316 Aligned Residues 204 % Identity 13% Template c3sz8D_ PDB info PDB header:transferase Chain: D: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase 2; PDBTitle: crystal structure of 2-dehydro-3-deoxyphosphooctonate aldolase from2 burkholderia pseudomallei Resolution 2.05 Å

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		3	.	.	.	.	.	.	10			.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.						.	.	30	.	.	.	.	.									.	.	.	.						40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
Predicted Secondary structure										.	.																		.	.	.	.	.									.	.	.	.	.	.	.	.					.	.	.	.	.
Query SS confidence										.	.																		.	.	.	.	.									.	.	.	.	.	.	.	.					.	.	.	.	.
Query Sequence		L	P	M	L	Q	V	A	L	.	.	D	N	Q	T	M	D	S	A	Y	E	T	T	R	L	I	A	E	.	.	.	.	.	E	V	D	I	I	E	V	G	.	.	.	.	.	.	.	.	T	I	L	C	.	.	.	.	.	V	G	E	G	V	R	A	V	R	D	L	K	A	L	Y	P	H	K	I	V	L	A	D
Query Conservation										.	.																		.	.	.	.	.									.	.	.	.	.	.	.	.					.	.	.	.	.
Alig confidence										.	.																		.	.	.	.	.									.	.	.	.	.	.	.	.					.	.	.	.	.																	.	.	.
Template Conservation																																																																											.	.	.
Template Sequence		L	P	F	V	L	F	G	G	I	N	V	L	E	S	L	D	F	T	L	D	V	C	G	E	Y	V	A	V	T	R	K	L	G	I	P	F	V	F	K	A	S	F	D	K	A	N	R	S	S	I	H	S	Y	R	G	V	G	L	D	E	G	L	K	I	F	A	E	V	K	A	R	F	G	.	.	.	V	P	V	I
Template Known Secondary structure		S																																T									S			T	T		S	S	T	T	S				S																		.	.	.
Template Predicted Secondary structure																																																																											.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.				.	.	90	.
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.						.	130	.	.	.	.	.	.	.
Predicted Secondary structure																																																																				.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.
Query Sequence		A	K	I	A	D	A	G	K	I	L	S	R	M	C	F	E	A	N	A	D	W	V	T	V	I	C	C	A	D	I	N	T	A	K	G	A	L	D	V	A	K	E	F	N	G	D	V	Q	I	E	L	T	G	Y	W	T	W	E	Q	A	Q	Q	W	R	D	A	.	.	.	.	.	G	I	G	Q	V	V	Y	H	R
Query Conservation																																																																				.	.	.	.	.
Alig confidence										.	.								.															.	.																																	.	.	.	.	.
Template Conservation										.	.								.															.	.
Template Sequence		T	D	V	H	E	A	E	Q	.	.	A	A	P	V	A	E	I	.	A	D	V	L	Q	V	P	A	F	L	A	R	Q	T	.	.	D	L	V	V	A	I	A	K	A	G	K	P	V	N	V	K	K	P	Q	F	M	S	P	T	Q	L	K	H	V	V	S	K	C	G	E	V	G	N	D	R	V	M	L	C	E	R
Template Known Secondary structure						S	G	G	G	.	.								.		S						G	G	G	T	T			.	.									T		S								T	T	S		T	T	S											T	T
Template Predicted Secondary structure										.	.								.															.	.
Template SS confidence
		92	.	.	.	.	.	.	.			100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120			.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160		.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190							.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.																	.															.	.	.	.	.	.
Query SS confidence																									.																	.															.	.	.	.	.	.
Query Sequence		S	R	D	A	Q	A	A	G	V	A	W	G	E	A	D	I	T	A	I	K	R	L	S	.	D	M	G	F	K	V	T	V	T	G	G	L	A	L	E	D	.	L	P	L	F	K	G	I	P	I	H	V	F	I	A	.	.	.	.	.	.	G	R	S	I	R	D	A	A	S	P	V	E	A	A	R	Q	F	K	R
Query Conservation																									.																	.															.	.	.	.	.	.
Alig confidence																									.																	.															.	.	.	.	.	.														.
Template Conservation																																																																												.
Template Sequence		G	S	S	F	G	Y	D	N	L	V	V	D	M	L	G	F	R	Q	M	A	E	T	T	G	G	C	P	V	I	F	D	V	T	H	S	L	Q	V	L	D	L	A	R	A	G	I	A	V	G	I	A	G	L	F	L	E	A	H	P	D	P	D	R	A	R	P	S	A	L	P	L	H	Q	L	.	E	G	L	L	S
Template Known Secondary structure						S	S	S						T	T								T	T	T	S							T	T	T	T																S								S		S	T	T								G	G	G		.
Template Predicted Secondary structure																																																																												.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240		.	.	.	.	.
		210	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	A	E	L	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	M	K	A	I	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		264	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions