Job Description P39304 Confidence 99.95% Date Thu Jan 5 11:59:08 GMT 2012 Rank 27 Aligned Residues 211 % Identity 16% Template c3qw4B_ PDB info PDB header:transferase, lyase Chain: B: PDB Molecule:ump synthase; PDBTitle: structure of leishmania donovani ump synthase Resolution 3.00 Å

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		2	.	.	.	.	.	.	.	10	.							.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.					.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure												.	.	.	.	.	.																																											.	.	.	.
Query SS confidence												.	.	.	.	.	.																																											.	.	.	.
Query Sequence		S	L	P	M	L	Q	V	A	L	D	.	.	.	.	.	.	N	Q	T	M	D	S	A	Y	E	T	T	R	L	I	A	E	E	V	D	I	I	E	V	G	T	I	L	C	V	G	E	G	V	R	A	V	R	D	L	K	A	L	.	.	.	.	Y	P	H	K	I	V	L	A	D	A	K	I	A	D	A	G	K	I
Query Conservation												.	.	.	.	.	.																																											.	.	.	.
Alig confidence												.	.	.	.	.	.																																											.	.	.	.
Template Conservation
Template Sequence		K	R	S	L	L	C	V	G	L	D	P	R	A	K	T	A	A	A	A	V	E	E	C	K	R	L	I	E	Q	T	H	E	Y	A	A	A	Y	K	P	N	A	A	F	F	E	F	F	G	A	E	G	W	A	A	L	S	E	V	I	R	A	V	P	A	G	I	P	V	V	L	D	A	K	R	G	D	I	A	D	T
Template Known Secondary structure		T	T												S	S																G	G	G		S					B						T	T														T	S		T	T	S		B
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		72				.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure			.	.	.							.																																																																			.	.	.
Query SS confidence			.	.	.							.																																																																			.	.	.
Query Sequence		L	.	.	.	S	R	M	C	F	E	.	A	N	A	D	W	V	T	V	I	C	C	A	D	I	N	T	A	K	G	A	L	D	V	A	K	E	F	N	G	D	V	Q	I	E	L	T	G	Y	W	T	W	E	Q	A	Q	Q	W	R	D	A	G	I	G	Q	V	V	Y	H	R	S	R	D	A	Q	A	A	.	.	.
Query Conservation			.	.	.							.																																																																			.	.	.
Alig confidence			.	.	.							.																						.	.	.																																											.	.	.
Template Conservation																																		.	.	.
Template Sequence		A	D	A	Y	A	T	S	A	F	K	H	L	N	A	H	A	I	T	A	S	P	Y	M	G	S	D	S	L	Q	P	F	M	.	.	.	R	Y	P	D	K	A	V	F	V	L	C	K	T	S	N	K	G	S	N	D	L	Q	C	L	R	V	G	D	R	Y	L	Y	E	A	V	A	E	R	A	E	G	P	W	N	V
Template Known Secondary structure											T	T	S			S						S	T	T										.	.	.	T		T	T	S									S	S	G	G	G	G	G	T	T	T	S			T	T												T	T	T	T		T
Template Predicted Secondary structure																																		.	.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.				.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
						145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160				.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.							.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure		.	.	.	.																	.	.	.																											.	.	.	.	.	.
Query SS confidence		.	.	.	.																	.	.	.																											.	.	.	.	.	.
Query Sequence		.	.	.	.	G	V	A	W	G	E	A	D	I	T	A	I	K	R	L	S	.	.	.	D	M	G	F	K	V	T	V	T	G	G	L	A	L	E	D	L	P	L	F	K	G	I	P	I	H	.	.	.	.	.	.	V	F	I	A	G	R	S	I	R	D	A	A	S	P	V	E	A	A	R	Q	F	K	R	S	I
Query Conservation		.	.	.	.																	.	.	.																											.	.	.	.	.	.
Alig confidence		.	.	.	.																	.	.	.																											.	.	.	.	.	.
Template Conservation
Template Sequence		N	G	N	V	G	L	V	V	G	A	T	D	P	V	A	L	A	R	V	R	A	R	A	P	T	L	W	F	L	V	P	G	I	G	A	Q	G	G	S	L	K	A	S	L	D	A	G	L	R	A	D	G	S	G	M	L	I	N	V	S	R	G	L	A	R	A	A	D	P	R	A	A	A	K	E	L	C	E	E	I
Template Known Secondary structure		T	S								T	T													S	S								S	S	T	T														T	T	S								S					S		S
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		212	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	L	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	A	I	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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