Job Description P39304 Confidence 99.62% Date Thu Jan 5 11:59:08 GMT 2012 Rank 69 Aligned Residues 190 % Identity 15% Template c3o63B_ PDB info PDB header:transferase Chain: B: PDB Molecule:probable thiamine-phosphate pyrophosphorylase; PDBTitle: crystal structure of thiamin phosphate synthase from mycobacterium2 tuberculosis Resolution 2.35 Å

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		1	.	.	.							.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.											.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.
Predicted Secondary structure						.	.	.	.	.	.																						.										.	.	.	.	.	.	.	.	.	.																					.	.
Query SS confidence						.	.	.	.	.	.																						.										.	.	.	.	.	.	.	.	.	.																					.	.
Query Sequence		M	S	L	P	.	.	.	.	.	.	M	L	Q	V	A	L	D	N	Q	T	M	D	S	A	Y	E	T	T	R	L	I	.	A	E	E	V	D	I	I	E	V	.	.	.	.	.	.	.	.	.	.	G	T	I	L	C	V	G	E	G	V	R	A	V	R	D	L	K	A	L	Y	.	.	P	H	K	I	V	L	A
Query Conservation						.	.	.	.	.	.																						.										.	.	.	.	.	.	.	.	.	.																					.	.
Alig confidence						.	.	.	.	.	.																						.										.	.	.	.	.	.	.	.	.	.																					.	.
Template Conservation
Template Sequence		M	H	E	S	R	L	A	S	A	R	L	Y	L	C	T	D	A	R	R	E	R	G	D	L	A	Q	F	A	E	A	A	L	A	G	G	V	D	I	I	Q	L	R	D	K	G	S	P	G	E	L	R	F	G	P	L	Q	A	R	D	E	L	A	A	C	E	I	L	A	D	A	A	H	R	Y	G	A	L	F	A	V
Template Known Secondary structure																				T	T	T													T	T		S							T	T									S																			T	T	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	K	I	A	D	A	G	K	I	L	S	R	M	C	F	E	A	N	A	D	W	V	T	V	I	C	C	A	D	I	N	T	A	K	G	A	L	D	V	A	K	E	F	N	G	D	V	Q	I	E	L	T	G	Y	W	T	W	E	Q	A	Q	Q	W	R	D	A	G	I	G	Q	V	V	Y	H	R	S	R	D	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.																									.	.	.	.	.																			.
Template Conservation		.	.	.	.	.	.	.	.																									.	.	.	.	.																			.
Template Sequence		.	.	.	.	.	.	.	.	N	D	R	A	D	I	A	R	A	A	G	A	D	V	L	H	L	G	Q	R	D	L	P	V	.	.	.	.	.	N	V	A	R	Q	I	L	A	P	D	T	L	I	G	R	S	T	H	.	D	P	D	Q	V	A	A	A	A	A	G	D	A	D	Y	F	C	V	G	P	C	W	P	A
Template Known Secondary structure		.	.	.	.	.	.	.	.		S								T	T		S						T	T	S				.	.	.	.	.							S		T	T									.	S										S	S		S							S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																									.	.	.	.	.																			.
Template SS confidence
										81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.						.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	A	G	V	A	W	G	E	A	D	I	T	A	I	K	R	L	S	D	M	G	F	K	V	T	V	T	G	G	L	A	L	E	D	L	P	L	F	K	G	I	P	I	H	V	F	I	A	G	R	S	I	R	D	A	A	S	P	V	E	A	A	R	Q	F	K	R	S	I	A	E
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.
Template Sequence		P	G	L	G	.	.	.	.	.	.	.	.	.	L	V	R	V	A	A	E	L	D	K	P	W	F	A	I	G	G	I	N	A	Q	R	L	P	A	V	L	D	A	G	A	R	R	I	V	V	V	R	A	I	T	S	A	D	D	P	R	A	A	A	E	Q	L	R	S	A	L	T	A
Template Known Secondary structure						.	.	.	.	.	.	.	.	.							T									S	S			T	T	T							T	T		S					S					T		S	S													S
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.
Template SS confidence
		155	.	.	.										.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions