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Job DescriptionP39304
Confidence76.71%DateThu Jan 5 11:59:08 GMT 2012
Rank439Aligned Residues184
% Identity14%Templatec3nvtA_
PDB info PDB header:transferase/isomeraseChain: A: PDB Molecule:3-deoxy-d-arabino-heptulosonate 7-phosphate synthase; PDBTitle: 1.95 angstrom crystal structure of a bifunctional 3-deoxy-7-2 phosphoheptulonate synthase/chorismate mutase (aroa) from listeria3 monocytogenes egd-e
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  SLPMLQVALDNQTMDSAYETTRLI. AEEVDIIEVGT. . . . . . . ILCVGEGVRAVRDLKALYPHKIVLADAKIADAGKILS
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Template Sequence  EPVFVFGPCSVESYEQVAAVAESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEYGLGVISEIVTPAD. . I
Template Known Secondary structure  S

SB


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   118.120.........130.........140.........150.........160.........170.........180.........190.... .
 
   74.....80.........90.........100.........110.........120........ .130........ .140......
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Query Sequence  RMCFEANADWVTVICCADINTAKGALDVAKEFNGDVQIELTGYWTWEQAQQWRDA. . . . . GIGQVVYHRS. . RDAQAAGV
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Template Sequence  EVALDY. VDVIQIGARNMQNF. . ELLKAAGRVDKPILLKRGLSATIEEFIGAAEYIMSQGNGKIILCERGIRTYEKATRN
Template Known Secondary structure  TTT.
S
GGGTT
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TT

TTT




B

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   196...200. ........210..... ....220.........230.........240.........250.........260.........270..
 
   147..150.........160.........170... ......180.........190
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Query Sequence  AWGEADITAIKRLSDMGFKVTVTGGLA. . . . . LEDLPLFKGIPIHVFIA
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Template Sequence  TLDISAVPILKKETHLPVMVDVTHSTGRKDLLLPCAKAALAIEADGVMA
Template Known Secondary structure  B

TTBSS


GGGTT
S
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   273......280.........290.........300.........310.........320.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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