Job Description P39304 Confidence 95.17% Date Thu Jan 5 11:59:08 GMT 2012 Rank 290 Aligned Residues 197 % Identity 8% Template c3lmzA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:putative sugar isomerase; PDBTitle: crystal structure of putative sugar isomerase. (yp_001305105.1) from2 parabacteroides distasonis atcc 8503 at 1.44 a resolution Resolution 1.44 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.					.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																							.																					.	.															.	.	.	.
Query SS confidence																							.																					.	.															.	.	.	.
Query Sequence		T	M	D	S	A	Y	E	T	T	R	L	I	A	E	E	V	D	I	I	E	V	.	G	T	I	L	C	V	G	E	G	V	R	A	V	R	D	L	K	A	L	Y	.	.	P	H	K	I	V	L	A	D	A	K	I	A	D	A	.	.	.	.	G	K	I	L	S	R	M	C	F	E	A	N	A	D	W	V	T	V
Query Conservation																							.																					.	.															.	.	.	.
Alig confidence													.	.									.																					.	.															.	.	.	.
Template Conservation													.	.
Template Sequence		D	L	D	T	T	L	K	T	L	E	R	.	.	L	D	I	H	Y	L	C	I	K	D	F	H	L	P	L	N	S	T	D	E	Q	I	R	A	F	H	D	K	C	A	A	H	K	V	T	G	Y	A	V	G	P	I	Y	X	K	S	E	E	E	I	D	R	A	F	D	Y	A	K	R	V	G	V	K	L	I	V	G
Template Known Secondary structure													.	.	T	T								T	T	T	S		T	T																T	T													S															T		S
Template Predicted Secondary structure													.	.
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.			.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.						.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.																																																.	.
Query SS confidence																												.	.	.	.	.																																																.	.
Query Sequence		I	C	C	A	D	I	N	T	A	K	G	A	L	D	V	A	K	E	F	N	G	D	V	Q	I	E	.	.	.	.	.	L	T	G	Y	W	T	W	E	Q	A	Q	Q	W	R	D	A	G	I	G	Q	V	V	Y	H	R	S	R	D	A	Q	A	A	G	V	A	W	G	E	A	D	I	T	A	I	K	R	L	.	.
Query Conservation																												.	.	.	.	.																																																.	.
Alig confidence				.	.																							.	.	.	.	.																																																.	.
Template Conservation				.	.
Template Sequence		V	P	.	.	N	Y	E	L	L	P	Y	V	D	K	K	V	K	E	Y	D	F	H	Y	A	I	H	L	H	G	P	D	I	K	T	Y	P	D	A	T	D	V	W	V	H	T	K	D	L	D	P	R	I	G	X	C	L	D	V	G	H	D	L	R	N	G	C	D	P	V	A	D	L	K	K	Y	H	T	R	V	F
Template Known Secondary structure				.	.		G	G	G												T										T	T		S	S	S		S									T	T	S		T	T													T	T											G	G	G
Template Predicted Secondary structure				.	.
Template SS confidence
		135	.			.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
													160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																							.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.																							.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	S	D	M	G	F	K	V	T	V	T	G	G	L	A	L	E	D	L	P	L	F	K	.	G	I	P	I	H	V	F	I	A	G	R	S	I	R	D	A	A	S	P	V	E	A	A	R	Q	F	K	R	S	I	A	E	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.																							.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																							.
Template Conservation
Template Sequence		D	X	H	I	K	D	V	T	D	S	S	K	A	G	V	G	I	E	I	G	R	G	K	I	D	F	P	A	L	I	R	X	X	R	E	V	N	Y	T	G	X	C	S	L	E	Y	E	K	D	X	K	D	P	F	L	G	I	A	E	S	I	G	Y	F	K	A	V
Template Known Secondary structure									S		S	S	T	T						T	T	S	S	S													T	T			S								S	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions