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Job DescriptionP39304
Confidence99.66%DateThu Jan 5 11:59:08 GMT 2012
Rank66Aligned Residues198
% Identity21%Templatec3labA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:putative kdpg (2-keto-3-deoxy-6-phosphogluconate) PDBTitle: crystal structure of a putative kdpg (2-keto-3-deoxy-6-2 phosphogluconate) aldolase from oleispira antarctica
Resolution1.84 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20..... ....30.........40.........50.........60.........70.........80
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Query Sequence  SLPMLQVALDNQTMDSAYETTRLI. AEEVDIIEVGTILCVGEGVRAVRDLKALYPHKIVLADAKIADAGKILSRMCFEAN
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Template Sequence  TKPLIPV. IVIDDLVHAIPXAKALVAGGVHLLEV. . TLRTEAGLAAISAIKKAVPEAIVGAG. TVCTADD. . FQKAIDAG
Template Known Secondary structure  S
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S
GGGTT

..TTSTT
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S..T
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Query Sequence  ADWVTVICCADINTAKGALDVAKEFNGDVQIELTGYWTWEQAQQWRDAGIGQVVYHRSRDAQAAGVAWGEADITAIKRLS
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Template Sequence  AQFIVSPG. LTPELIEKAKQVKLDGQWQ. GVFLPGVATASEVXIAAQAGITQLKCFPA. . . . . . SAIGGAKLLKAWSGPF
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Query Sequence  DMGFKVTVTGGLALEDLPLFKGIPIHVFIAGRSIRDAASPVEA. ARQFKRSIAEL
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Template Sequence  P. DIQFCPTGGISKDNYKEYLGLPNVICAGGSWLTESKLLIEGDWNEVTRRASEI
Template Known Secondary structure  T.T
BSS

TTTSTTB

SGGG
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   157 ..160.........170.........180.........190.........200.........210
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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