Job Description P39304 Confidence 99.94% Date Thu Jan 5 11:59:08 GMT 2012 Rank 37 Aligned Residues 206 % Identity 18% Template c3l52A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:orotidine 5'-phosphate decarboxylase; PDBTitle: crystal structure of putative orotidine 5'-phosphate2 decarboxylase from streptomyces avermitilis ma-4680 Resolution 1.35 Å

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		2	.	.	.	.	.	.	.	10	.												.	.	.	.	.	.	.	.	20					.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.						.	.	.	.	.	.	60	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.										.	.	.	.																																		.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.										.	.	.	.																																		.	.	.	.	.
Query Sequence		S	L	P	M	L	Q	V	A	L	D	.	.	.	.	.	.	.	.	.	.	.	N	Q	T	M	D	S	A	Y	E	.	.	.	.	T	T	R	L	I	A	E	E	V	D	I	I	E	V	G	T	I	L	C	V	G	E	G	V	R	A	V	R	D	L	K	A	L	.	.	.	.	.	Y	P	H	K	I	V	L	A
Query Conservation												.	.	.	.	.	.	.	.	.	.	.										.	.	.	.																																		.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.										.	.	.	.																																		.	.	.	.	.
Template Conservation
Template Sequence		D	R	G	P	L	C	V	G	I	D	P	H	A	S	L	L	A	D	W	G	L	S	D	D	V	A	G	L	E	R	F	S	R	T	V	V	E	A	L	G	E	H	V	A	V	F	K	P	Q	S	A	F	F	E	R	F	G	S	R	G	V	A	V	L	E	K	T	V	A	E	A	R	A	A	G	A	L	V	V	X
Template Known Secondary structure					S															T	T			S	S																T	T	T		S					B						T	T																		T	T
Template Predicted Secondary structure
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.								80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	A	K	I	A	D	A	G	K	I	L	S	R	M	C	F	E	A	.	.	.	.	.	.	.	N	A	D	W	V	T	V	I	C	C	A	D	I	N	T	A	K	G	A	L	D	V	A	K	E	F	N	G	D	V	Q	I	E	L	T	G	Y	W	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																				.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	A	K	R	G	D	I	G	S	T	X	A	A	Y	A	E	A	F	L	R	K	D	S	P	L	F	S	D	A	L	T	V	S	P	Y	L	G	Y	G	S	L	R	P	A	V	E	L	A	R	E	S	G	A	G	L	F	V	L	A	L	T	S	N	P	E	G	G	E	V	Q	H	A	V	R	T	D	G	R	D	V
Template Known Secondary structure																				S	S	T	T	S	T	T			S							T	T		G	G	G	G											T											S	T	T	T					T		B		T	T	S		B
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
			119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.						.	.	.	190	.
Predicted Secondary structure		.																																																					.																	.	.	.	.	.
Query SS confidence		.																																																					.																	.	.	.	.	.
Query Sequence		.	W	E	Q	A	Q	Q	W	R	D	A	G	I	G	Q	V	V	Y	H	R	S	R	D	A	Q	A	A	G	V	A	W	G	E	A	D	I	T	A	I	K	R	L	S	D	M	G	F	K	V	T	V	T	G	.	G	L	A	L	E	D	L	P	L	F	K	G	I	P	I	H	.	.	.	.	.	V	F	I	A	G
Query Conservation		.																																																					.																	.	.	.	.	.
Alig confidence		.														.	.	.	.	.	.																																		.																	.	.	.	.	.
Template Conservation																.	.	.	.	.	.
Template Sequence		A	A	T	X	L	A	H	L	A	A	E	N	A	G	.	.	.	.	.	.	E	E	P	L	G	S	F	G	A	V	V	G	A	T	L	G	D	L	S	S	Y	D	L	D	I	N	G	P	L	L	A	P	G	I	G	A	Q	G	A	A	P	A	D	L	P	G	V	F	G	A	A	V	R	N	V	V	P	N	V	S
Template Known Secondary structure													T	T	T	.	.	.	.	.	.		S	S			S							T	T		S		G	G	G	S				S	S	S							T	T	S	T	T		S	G	G	G						G	G	G	G	G	G						S
Template Predicted Secondary structure																.	.	.	.	.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.							190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	I	R	D	A	A	S	P	V	E	A	A	R	Q	F	K	R	S	I	A	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	G	V	L	R	H	G	P	D	V	R	A	L	R	T	A	A	D	R	F	A	E
Template Known Secondary structure						T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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