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Job DescriptionP39304
Confidence96.70%DateThu Jan 5 11:59:08 GMT 2012
Rank237Aligned Residues211
% Identity11%Templatec3kwsB_
PDB info PDB header:isomeraseChain: B: PDB Molecule:putative sugar isomerase; PDBTitle: crystal structure of putative sugar isomerase (yp_001305149.1) from2 parabacteroides distasonis atcc 8503 at 1.68 a resolution
Resolution1.68 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70
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Query Sequence  MSLPMLQVALDNQTMDSAYETTRLIAEEVDIIEVGTILCVGEGVRAVRDLKALYPHKIVLADAKIADAGK. . . . . . . . . .
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Template Sequence  LKLSFQEGIAPGESLNEKLDFXEK. . LGVVGFEPGGGGLAGR. VNEIKQALNGRNIKVSAICAGFKGFILSTDPAIRKEC
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   51........60.........70.... .....80.........90 .........100.........110.........120.......
 
   71........80.........90.. .......100.........110..... ....120..
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Query Sequence  . . . . . ILSRMCFEANADWVTVICCADI. . . . . . . . . . . . . . . . NTAKGALDVAKEFNGDVQIELTG. . . . . . . YWTWEQA
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Template Sequence  XDTXKEIIAAAGELGSTGVIIVPAFNGQVPALPHTXETRDFLCEQFNEXGTFAAQHGTSVIFEPLNRKECFYLRQVADAA
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   128.130.........140.........150.........160.........170.........180.........190.........200.......
 
   123......130.........140.........150......... 160.........170.........180. ........190..
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Query Sequence  QQWRDAGIGQVVYHRSRDAQAAGVAWGEADITAIKRL. . . . . . . . . SDMGFKVTVTGGLALEDLPLFK. GIPIHVFIAGR
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Template Sequence  SLCRDINNPGVRCXGDFWHXTWEETSDXGAFISGGEYLQHVHVASRKRRSXPGEDGDADNYINGFKGLKXIGYNNYVSFE
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   208.210.........220.........230.........240.........250.........260.........270.........280.......
 
   193......200.........210.....
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Query Sequence  SIRDAASPVEAARQFKRSIAELW
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Template Sequence  . CGCQGDRNVVVPAAVKLLREQW
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   288.290.........300.........
 
Download:Text version

No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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