Job Description P39304 Confidence 97.89% Date Thu Jan 5 11:59:08 GMT 2012 Rank 168 Aligned Residues 133 % Identity 15% Template c3k30B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:histamine dehydrogenase; PDBTitle: histamine dehydrogenase from nocardiodes simplex Resolution 2.70 Å

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		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.																											.	.	.	.	.	100	.	.	.	.				.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.															.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.															.	.	.	.	.
Query Sequence		S	R	M	C	F	E	A	N	A	D	W	V	T	V	I	C	C	A	D	I	N	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	K	G	A	L	D	V	A	K	E	.	.	.	F	N	G	D	V	Q	I	E	L	T	G	Y	W	T	.	.	.	.	.
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.															.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.															.	.	.	.	.
Template Conservation
Template Sequence		V	R	R	S	I	E	A	G	Y	D	I	V	Y	V	Y	G	A	H	G	Y	S	G	V	H	H	F	L	S	K	R	Y	N	Q	R	T	D	E	Y	G	G	S	L	E	N	R	M	R	L	L	R	E	L	L	E	D	T	L	D	E	C	A	G	R	A	A	V	A	C	R	I	T	V	E	E	E	I	D	G	G	I
Template Known Secondary structure									T		S								T	T		S								T	T	T					S	T	T	S	S	S					T															S	S	S	S								S				S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
							119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.				140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.		.	.	.
Predicted Secondary structure		.	.	.	.	.																						.	.	.																							.												.													.
Query SS confidence		.	.	.	.	.																						.	.	.																							.												.													.
Query Sequence		.	.	.	.	.	W	E	Q	A	Q	Q	W	R	D	A	G	I	G	Q	V	V	Y	H	R	S	R	.	.	.	D	A	Q	A	A	G	V	A	W	G	E	A	D	I	T	A	I	K	R	L	S	D	.	M	G	F	K	V	T	V	T	G	G	L	.	A	L	E	D	L	P	L	F	K	G	I	P	.	I	H	V
Query Conservation		.	.	.	.	.																						.	.	.																							.												.													.
Alig confidence		.	.	.	.	.										.												.	.	.																							.												.													.
Template Conservation																.
Template Sequence		T	R	E	D	I	E	G	V	L	R	E	L	G	E	.	L	P	D	L	W	D	F	A	M	G	S	W	E	G	D	S	V	T	S	R	F	A	P	E	G	R	Q	E	E	F	V	A	G	L	K	K	L	T	T	K	P	V	V	G	V	G	R	F	T	S	P	D	A	M	V	R	Q	I	K	A	G	I	L	D	L
Template Known Secondary structure														T	T	.	S	S	S							S	S					S			T	T	T			T	T	T	T					T	T	T	G	G	G		S	S						S														T	T	S		S
Template Predicted Secondary structure																.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	A	G	R	S	I	R	D	A	A	S	P	V	E	A	A	R	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	G	A	A	R	P	S	I	A	D	P	F	L	P	N	K	I	R	D
Template Known Secondary structure					S							T	T
Template Predicted Secondary structure
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions