Job Description P39304 Confidence 98.57% Date Thu Jan 5 11:59:08 GMT 2012 Rank 109 Aligned Residues 167 % Identity 15% Template c3ivuB_ PDB info PDB header:transferase Chain: B: PDB Molecule:homocitrate synthase, mitochondrial; PDBTitle: homocitrate synthase lys4 bound to 2-og Resolution 2.72 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		T	M	D	S	A	Y	E	T	T	R	L	I	A	E	.	E	V	D	I	I	E	V	G	T	I	L	C	V	G	E	G	V	R	A	V	R	D	L	K	A	L	Y	P	H	K	I	V	L	A	D	A	K	I	A	D	A	G	K	I	L	S	R	M	C	F	E	A	N	A	D	W	V	T	V	I	C	C	A	D	I
Query Conservation																.
Alig confidence																.																																											.	.	.
Template Conservation																																																											.	.	.
Template Sequence		D	T	E	K	K	I	Q	I	A	K	A	L	D	N	F	G	V	D	Y	I	E	L	T	S	P	V	A	S	E	Q	S	R	Q	D	C	E	A	I	C	K	L	G	L	K	C	K	I	L	T	H	I	R	C	H	M	D	D	.	.	.	A	R	V	A	V	E	T	G	V	D	G	V	D	V	V	I	G	T	S	Q
Template Known Secondary structure																	T		S							G	G	G													T	S			S	S								S					.	.	.							T	T		S								G	G	G
Template Predicted Secondary structure																																																											.	.	.
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110				.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
															93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.			.	.	.	.	.	.	120					.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.								.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.								.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	N	T	A	K	G	A	L	D	V	A	K	E	F	N	G	D	V	Q	I	E	L	.	.	T	G	Y	W	T	W	E	.	.	.	.	Q	A	Q	Q	W	R	D	A	G	I	G	Q	V	V	Y	H	R	S	R	D	A	Q	A	A	G	V	A	W	G	E	A	D	I
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.								.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.								.	.	.	.																.	.	.	.	.
Template Conservation																																																																.	.	.	.	.
Template Sequence		Y	L	R	K	Y	S	H	D	M	T	Y	I	I	D	S	A	T	E	V	I	N	F	V	K	S	K	G	I	E	V	R	F	S	S	E	D	S	F	R	S	D	L	V	D	L	L	S	L	Y	K	A	V	D	K	I	G	V	N	R	V	G	I	.	.	.	.	.	A	D	T	V	G	C	A	T	P	R	Q	V	Y
Template Known Secondary structure																											T	T								T	T	G	G	G	S																		S					.	.	.	.	.			S	S	S
Template Predicted Secondary structure																																																																.	.	.	.	.
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.						.	.	.	.	.	.	.	200	.	.	.	.	.
		154	.	.	.	.	.	160	.		.	.	.	.	.	.	.					.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure										.								.	.	.	.
Query SS confidence										.								.	.	.	.
Query Sequence		T	A	I	K	R	L	S	D	.	M	G	F	K	V	T	V	.	.	.	.	T	G	G	L	A	L	E	D	L	P	L	F	K	G	I	P	I	H	V	F
Query Conservation										.								.	.	.	.
Alig confidence										.								.	.	.	.
Template Conservation
Template Sequence		D	L	I	R	T	L	R	G	V	V	S	C	D	I	E	C	H	F	H	N	D	T	G	M	A	I	A	N	A	Y	C	A	L	E	A	G	A	T	H	I
Template Known Secondary structure												S	S							B		T	T	S													T
Template Predicted Secondary structure
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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