Job Description P39304 Confidence 99.74% Date Thu Jan 5 11:59:08 GMT 2012 Rank 53 Aligned Residues 193 % Identity 13% Template c3igsB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:n-acetylmannosamine-6-phosphate 2-epimerase 2; PDBTitle: structure of the salmonella enterica n-acetylmannosamine-6-phosphate2 2-epimerase Resolution 1.50 Å

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		6	.	.	.	10	.							.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.								60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure								.	.	.	.	.	.													.																																					.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.													.																																					.	.	.	.	.	.	.
Query Sequence		L	Q	V	A	L	D	.	.	.	.	.	.	N	Q	T	M	D	S	A	Y	E	T	T	R	.	L	I	A	E	E	V	D	I	I	E	V	G	T	I	L	C	V	G	E	G	V	R	A	V	R	D	L	K	A	L	Y	P	H	K	I	V	.	.	.	.	.	.	.	L	A	D	A	K	I	A	D	A	G	K	I
Query Conservation								.	.	.	.	.	.													.																																					.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.													.												.	.	.	.	.	.	.																			.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.
Template Sequence		L	I	V	S	C	Q	P	V	P	G	S	P	L	D	K	P	E	I	V	A	A	X	A	L	A	A	E	Q	A	G	A	V	A	V	R	I	.	.	.	.	.	.	.	E	G	I	D	N	L	R	X	T	R	S	L	V	S	V	P	I	I	G	I	I	K	R	D	L	D	E	S	P	V	R	I	T	P	F	L	D
Template Known Secondary structure										T	T		T	T		S													T	T	T		S					.	.	.	.	.	.	.		S								B	T	T	B		S							B				S	S		S			B	S		S
Template Predicted Secondary structure																																						.	.	.	.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.								.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90			.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		L	S	R	M	C	F	E	A	N	A	D	W	V	T	V	I	C	C	A	.	.	D	I	N	T	A	K	G	A	L	D	V	A	K	E	F	N	G	D	V	Q	I	E	L	T	G	Y	W	T	W	E	Q	A	Q	Q	W	R	D	A	G	I	G	Q	V	V	Y	H	R	S	R	D	A	Q	A	A	G	V	A	W	G
Query Conservation																					.	.
Alig confidence																					.	.																											.	.	.																													.	.
Template Conservation																																																	.	.	.																													.	.
Template Sequence		D	V	D	A	L	A	Q	A	G	A	A	I	I	A	V	D	G	T	A	R	Q	R	P	V	A	V	E	A	L	L	A	R	I	H	H	H	H	L	L	T	X	A	D	C	S	S	V	.	.	.	D	D	G	L	A	C	Q	R	L	G	A	D	I	I	G	T	T	X	S	G	Y	T	T	P	D	T	P	E	.	.
Template Known Secondary structure									T	T		S									S	S		S	S												T	T									S		.	.	.										T		S					T	T	T	T		S	S	S				S	.	.
Template Predicted Secondary structure																																																	.	.	.																													.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.				.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		E	A	D	I	T	A	I	K	R	L	S	D	M	G	F	K	V	T	V	T	G	G	L	.	A	L	E	D	L	P	L	F	K	G	I	P	I	H	V	F	I	A	G	R	S	I	R	D	A	A	S	P	V	E	A	A	R	Q	F	K	R	S	I	A	E
Query Conservation																									.
Alig confidence																									.																									.	.	.
Template Conservation																																																		.	.	.
Template Sequence		E	P	D	L	P	L	V	K	A	L	H	D	A	G	C	R	V	I	A	E	G	R	Y	N	S	P	A	L	A	A	E	A	I	R	Y	G	A	W	A	V	T	V	G	S	A	I	T	R	.	.	.	L	E	H	I	C	G	W	Y	N	D	A	L	K	K
Template Known Secondary structure		S												T	T							S				S										T	T		S											.	.	.
Template Predicted Secondary structure																																																		.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.				.	.	.	.	.	.	.	220	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions