Job Description P39304 Confidence 93.46% Date Thu Jan 5 11:59:08 GMT 2012 Rank 310 Aligned Residues 190 % Identity 16% Template c3fk4A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:rubisco-like protein; PDBTitle: crystal structure of rubisco-like protein from bacillus2 cereus atcc 14579 Resolution 2.00 Å

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		14	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.											40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.			.	.	.	.	.	.	.	80
Predicted Secondary structure														.															.	.	.	.	.	.	.	.	.	.																																		.	.
Query SS confidence														.															.	.	.	.	.	.	.	.	.	.																																		.	.
Query Sequence		T	M	D	S	A	Y	E	T	T	R	L	I	.	A	E	E	V	D	I	I	E	V	G	T	I	L	C	.	.	.	.	.	.	.	.	.	.	V	G	E	G	V	R	A	V	R	D	L	K	A	L	Y	P	H	K	I	V	L	A	D	A	K	I	A	D	A	G	K	I	L	.	.	S	R	M	C	F	E	A	N
Query Conservation														.															.	.	.	.	.	.	.	.	.	.																																		.	.
Alig confidence														.															.	.	.	.	.	.	.	.	.	.																																		.	.
Template Conservation
Template Sequence		N	I	G	Y	L	K	T	Q	L	R	D	Q	A	I	G	G	V	D	I	V	K	D	D	E	I	L	F	E	N	A	L	T	P	L	T	K	R	I	V	S	G	K	E	V	L	Q	S	V	Y	E	T	Y	G	H	K	T	L	Y	A	V	N	L	T	G	R	T	F	D	L	K	E	N	A	K	R	A	V	Q	A	G
Template Known Secondary structure																T	T		S						T	T			S		S	S	S																																S		G	G	G												T
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		81	.	.	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.															.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure												.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	D	W	V	T	V	I	C	C	A	.	D	I	N	T	A	K	G	A	L	D	V	A	K	E	F	N	G	D	V	Q	I	E	L	T	G	Y	W	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	E	Q	A	Q	Q	W	R	D	A	G	I	G	Q	V	V	Y	H	R	S	R	D	A	Q	A	A	G
Query Conservation												.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.											.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.
Template Conservation																							.	.	.																																																				.	.	.	.	.
Template Sequence		A	D	I	L	L	F	N	V	F	A	Y	G	L	D	V	L	Q	S	L	A	E	.	.	.	D	D	E	I	P	V	P	I	M	A	H	P	A	V	S	G	A	Y	S	A	S	K	L	Y	G	V	S	S	P	L	L	L	G	K	L	L	R	Y	A	G	A	D	F	S	L	F	P	S	P	Y	K	.	.	.	.	.
Template Known Secondary structure			S																				.	.	.		T	T	S		S							T	T	T					S		S	S	S	S	B							T							T		S										.	.	.	.	.
Template Predicted Secondary structure																							.	.	.																																																				.	.	.	.	.
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.				.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.			.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																		.	.																							.								.										.
Query SS confidence																		.	.																							.								.										.
Query Sequence		V	A	W	G	E	A	D	I	T	A	I	K	R	L	S	D	.	.	M	G	F	K	V	T	V	T	G	G	L	A	L	E	D	L	P	L	F	K	G	I	.	P	I	H	V	F	I	A	.	G	R	S	I	R	D	A	A	S	.	P	V	E	A	A	R	Q	F	K	R	S	I	A
Query Conservation																		.	.																							.								.										.
Alig confidence		.																.	.																							.								.										.
Template Conservation		.
Template Sequence		.	E	E	A	L	A	I	S	K	Y	L	T	E	D	D	A	S	F	K	K	S	F	S	V	P	S	A	G	I	H	P	G	F	V	P	F	I	V	R	D	F	G	K	D	V	V	I	N	A	G	G	G	I	H	G	H	P	N	G	A	Q	G	G	G	K	A	F	R	T	A	I	D
Template Known Secondary structure		.												S			T	T	S									S	S			G	G	G										S	S	B					G	G	G	G	G	G	S	T	T
Template Predicted Secondary structure		.
Template SS confidence
			312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions