Job Description P39304 Confidence 78.18% Date Thu Jan 5 11:59:08 GMT 2012 Rank 431 Aligned Residues 165 % Identity 17% Template c3eooL_ PDB info PDB header:lyase Chain: L: PDB Molecule:methylisocitrate lyase; PDBTitle: 2.9a crystal structure of methyl-isocitrate lyase from2 burkholderia pseudomallei Resolution 2.90 Å

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.					.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.															.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	L	C	V	G	E	G	V	R	A	V	R	D	L	K	A	L	Y	P	H	K	I	V	L	A	D	A	K	I	A	D	A	G	K	I	L	.	.	.	.	S	R	M	C	F	E	A	N	A	D	W	V	T	V	I	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	A	D	I	N	T	A	K	G	A
Query Conservation																																						.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.																			.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.
Template Sequence		I	S	T	M	D	D	V	L	V	D	A	N	R	I	T	N	A	.	T	N	L	P	L	L	V	D	I	D	T	G	W	G	G	A	F	N	I	A	R	T	I	R	S	F	I	K	A	G	V	G	A	V	H	L	E	D	Q	V	G	Q	K	R	C	G	H	R	P	G	K	E	C	V	P	A	G	E	M	V	D	R
Template Known Secondary structure																			.			S							T	T		S	S	S														T	T		S							B						T	T							B
Template Predicted Secondary structure																			.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		99	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.									.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.			.	.
Predicted Secondary structure							.	.														.	.	.	.	.	.	.	.																																																	.	.
Query SS confidence							.	.														.	.	.	.	.	.	.	.																																																	.	.
Query Sequence		L	D	V	A	K	.	.	E	F	N	G	D	V	Q	I	E	L	T	G	Y	.	.	.	.	.	.	.	.	W	T	W	E	Q	A	Q	Q	W	R	D	A	G	I	G	Q	V	V	Y	H	R	S	R	D	A	Q	A	A	G	V	A	W	G	E	A	D	I	T	A	I	K	R	L	S	D	M	G	F	.	.	K	V
Query Conservation							.	.														.	.	.	.	.	.	.	.																																																	.	.
Alig confidence							.	.														.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.																.	.
Template Conservation																																																						.	.	.	.	.	.	.	.	.
Template Sequence		I	K	A	A	V	D	A	R	T	D	E	T	F	V	I	M	A	R	T	D	A	A	A	A	E	G	I	D	A	A	I	E	R	A	I	A	Y	V	E	A	G	A	D	M	I	F	P	E	A	M	K	T	.	.	.	.	.	.	.	.	.	L	D	D	Y	R	R	F	K	E	A	V	K	V	P	I	L	A	N	L
Template Known Secondary structure										S		T	T	S																												T		S									S	.	.	.	.	.	.	.	.	.													S		B
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.										.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	T	G	G	L	A	L	E	D	L	P	L	F	K	G	I	P	I	H	V	F	I	A	G	R	S	I	R	D	A	A	S	P	V	E	A	A	R	Q	F	K	R	S	I	A	E
Query Conservation
Alig confidence																																	.	.
Template Conservation																																	.	.
Template Sequence		T	E	F	G	S	T	P	L	F	T	L	D	E	L	K	G	A	N	V	D	I	A	L	Y	C	C	G	A	Y	R	A	.	.	M	N	K	A	A	L	N	F	Y	E	T	V	R	R
Template Known Secondary structure			T	T	S	S	S											T	T								S						.	.
Template Predicted Secondary structure																																	.	.
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.			.	.	.	.	.	250	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions