Job Description P39304 Confidence 96.25% Date Thu Jan 5 11:59:08 GMT 2012 Rank 258 Aligned Residues 173 % Identity 14% Template c3eegB_ PDB info PDB header:transferase Chain: B: PDB Molecule:2-isopropylmalate synthase; PDBTitle: crystal structure of a 2-isopropylmalate synthase from2 cytophaga hutchinsonii Resolution 2.78 Å

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		14	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure														.																																												.
Query SS confidence														.																																												.
Query Sequence		T	M	D	S	A	Y	E	T	T	R	L	I	.	A	E	E	V	D	I	I	E	V	G	T	I	L	C	V	G	E	G	V	R	A	V	R	D	L	K	A	L	Y	P	H	K	I	V	L	A	D	A	K	I	A	D	A	.	G	K	I	L	S	R	M	C	F	E	A	N	A	D	W	V	T	V	I	C	C	A	D
Query Conservation														.																																												.
Alig confidence														.																																												.
Template Conservation
Template Sequence		N	T	E	E	K	I	I	V	A	K	A	L	D	E	L	G	V	D	V	I	E	A	G	F	P	V	S	S	P	G	D	F	N	S	V	V	E	I	T	K	A	V	T	R	P	T	I	C	A	L	T	R	A	K	E	A	D	I	N	I	A	G	E	A	L	R	F	A	K	R	S	R	I	H	T	G	I	G	S	S
Template Known Secondary structure															T	T	T		S							T	T	T													T	T			S	S								S													T	T		S	S										S
Template Predicted Secondary structure
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		92	.	.																.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.			.	.	.	.	.	.	120					.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.								.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.								.	.	.	.
Query Sequence		I	N	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	K	G	A	L	D	V	A	K	E	F	N	G	D	V	Q	I	E	L	.	.	T	G	Y	W	T	W	E	.	.	.	.	Q	A	Q	Q	W	R	D	A	G	I	G	Q	V	V	Y	H	R	S	R	D	A	Q	A	A	G	V	A	W	G	E
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.								.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.								.	.	.	.															.	.
Template Conservation																																																																		.	.
Template Sequence		D	I	H	I	E	H	K	L	R	S	T	R	E	N	I	L	E	X	A	V	A	A	V	K	Q	A	K	K	V	V	H	E	V	E	F	F	C	E	D	A	G	R	A	D	Q	A	F	L	A	R	X	V	E	A	V	I	E	A	G	A	D	V	V	N	.	.	I	P	D	T	T	G	Y	X	L	P	W	Q	Y	G
Template Known Secondary structure								T	S	T	T			T	T	T	T														S	S								S	T	T	T	S														T	T	T		S				.	.				S	S	S
Template Predicted Secondary structure																																																																		.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.			.	.	170	.	.	.	.	.	.	.	.	.	180	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170							.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.
Query Sequence		A	D	I	T	A	I	K	R	L	S	D	M	G	F	K	V	T	V	T	G	.	.	.	.	.	.	G	L	A	L	E	D	L	P	L	F	K	G	I	P	I	H	V	F
Query Conservation																						.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.
Template Conservation
Template Sequence		E	R	I	K	Y	L	X	D	N	V	S	N	I	D	K	A	I	L	S	A	H	C	H	N	D	L	G	L	A	T	A	N	S	L	A	A	L	Q	N	G	A	R	Q	V
Template Known Secondary structure												T	T	G	G	G	S							B		S	S	S											T	T	T
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions