Job Description P39304 Confidence 85.56% Date Thu Jan 5 11:59:08 GMT 2012 Rank 379 Aligned Residues 92 % Identity 13% Template c3dzdA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: crystal structure of sigma54 activator ntrc4 in the inactive2 state Resolution 2.40 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	M	D	S	A	Y	E	T	T	R	L	I	A	E	E	V	D	I	I	E	V	G	T	I	L	C	V	G	E	G	V	R	A	V	R	D	L	K	A	L	Y	P	H	K	I	V	L	A	D	A	K	I	A	D	A	G	K	I	L	S	R	M	C	F	E	A	N	A	D	W	V	T	V	I	C	C	A	D	I
Query Conservation
Alig confidence																											.	.																																.	.
Template Conservation																											.	.																																.	.
Template Sequence		K	T	L	R	E	A	E	K	K	I	K	E	L	F	F	P	V	I	V	L	D	V	W	X	P	.	.	D	G	D	G	V	N	F	I	D	F	I	K	E	N	S	P	D	S	V	V	I	V	I	T	G	H	G	S	V	D	T	.	.	A	V	K	A	I	K	K	G	A	Y	E	F	L	E	K	P	F	S	V	E
Template Known Secondary structure		S	S											S			S						S			T	.	.	T			T	T	T										T	T									S	S					.	.								T							S	S
Template Predicted Secondary structure																											.	.																																.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.			.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	T	A	K	G	A	L	D	V	A	K	E	F	N	G	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	F	L	L	T	I	K	H	A	F	E	E	Y	S	K	K
Template Known Secondary structure															S
Template Predicted Secondary structure
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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