Job Description P39304 Confidence 99.92% Date Thu Jan 5 11:59:08 GMT 2012 Rank 44 Aligned Residues 203 % Identity 12% Template c3cu2A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:ribulose-5-phosphate 3-epimerase; PDBTitle: crystal structure of ribulose-5-phosphate 3-epimerase (yp_718263.1)2 from haemophilus somnus 129pt at 1.91 a resolution Resolution 1.91 Å

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		1	.	.	.	.	.	.				.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.				.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure									.	.	.																					.	.	.
Query SS confidence									.	.	.																					.	.	.
Query Sequence		M	S	L	P	M	L	Q	.	.	.	V	A	L	D	N	Q	T	M	D	S	A	Y	E	T	T	R	L	I	A	E	.	.	.	E	V	D	I	I	E	V	G	T	I	L	C	V	G	E	G	V	R	A	V	R	D	L	K	A	L	Y	P	H	K	I	V	L	A	D	A	K	I	A	D	A	G	K	I	L	S	R
Query Conservation									.	.	.																					.	.	.
Alig confidence									.	.	.																					.	.	.																									.	.	.														.
Template Conservation																																																											.	.	.														.
Template Sequence		L	K	Q	Q	K	L	S	V	G	I	L	S	A	N	W	L	Q	L	N	E	E	V	T	T	L	L	E	N	Q	I	N	V	L	H	F	D	I	A	D	G	Q	F	S	S	L	F	T	V	G	A	I	G	I	K	Y	F	P	.	.	.	T	H	C	F	K	D	V	H	L	X	V	R	N	.	Q	L	E	V	A	K
Template Known Secondary structure			T	T							G	G	G	S		G	G	G											T	T										B	S	S	S	S	S		B		B		T					T	S		.	.	.	T	T	S									S		.
Template Predicted Secondary structure																																																											.	.	.														.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.				.	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.										.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.
Query Sequence		M	C	F	E	A	N	A	D	W	V	T	V	I	C	C	A	D	I	N	T	A	K	G	A	L	D	V	A	K	E	.	.	.	.	.	.	.	.	.	F	N	G	D	V	Q	I	E	L	T	G	Y	W	T	W	E	Q	A	Q	Q	W	R	D	A	G	I	G	Q	V	V	Y	H	R	S	R	D	A	Q	A	A	G
Query Conservation																																.	.	.	.	.	.	.	.	.
Alig confidence																						.										.	.	.	.	.	.	.	.	.																										.	.
Template Conservation																						.																																												.	.
Template Sequence		A	V	V	A	N	G	A	N	L	V	T	L	Q	L	E	Q	Y	H	D	F	.	A	L	T	I	E	W	L	A	K	Q	K	T	T	Y	A	N	Q	V	Y	P	V	L	I	G	A	C	L	C	P	E	T	P	I	S	E	L	E	P	Y	L	D	Q	I	.	.	D	V	I	Q	L	L	T	L	D	P	R	N	G	T
Template Known Secondary structure						T	T		S						T	T		T	T	S		.								T	T						T	T													T	T	S		G	G	G	G	T	T	T	T	T	T		.	.	S						S			T	T	T	T
Template Predicted Secondary structure																						.																																												.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.			.	150	.	.	.	.	.	.	.	.	.	160	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.							.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.			.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure																			.	.	.	.	.	.																								.	.
Query SS confidence																			.	.	.	.	.	.																								.	.
Query Sequence		V	A	W	G	E	A	D	I	T	A	I	K	R	L	S	D	M	.	.	.	.	.	.	G	F	K	V	T	V	T	G	G	L	A	L	E	D	L	P	L	F	K	G	I	P	I	.	.	H	V	F	I	A	G	R	S	I	R	D	A	A	S	P	V	E	A	A	R	Q	F	K	R	S	I
Query Conservation																			.	.	.	.	.	.																								.	.
Alig confidence																			.	.	.	.	.	.																								.	.												.
Template Conservation																																																													.
Template Sequence		K	Y	P	S	E	L	I	L	D	R	V	I	Q	V	E	K	R	L	G	N	R	R	V	E	K	L	I	N	I	D	G	S	X	T	L	E	L	A	K	Y	F	K	Q	G	T	H	Q	I	D	W	L	V	S	G	S	A	L	F	S	.	G	E	L	K	T	N	L	K	V	W	K	S	S	I
Template Known Secondary structure																				G	G	G	G	G	G							S	S												S	S	S									G	G	G	G	S	.	S
Template Predicted Secondary structure																																																													.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.		.	.	.	.	.	.	.	.	230	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions