Job Description P39304 Confidence 96.40% Date Thu Jan 5 11:59:08 GMT 2012 Rank 252 Aligned Residues 124 % Identity 17% Template c3c2vA_ PDB info PDB header:transferase Chain: A: PDB Molecule:nicotinate-nucleotide pyrophosphorylase; PDBTitle: crystal structure of the quinolinate phosphoribosyl2 transferase (bna6) from saccharomyces cerevisiae complexed3 with prpp and the inhibitor phthalate Resolution 2.29 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.											.	.	.	.	.	.					.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.							.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.							.	.	.	.
Query Sequence		R	A	V	R	D	L	K	A	L	Y	P	H	K	I	V	L	A	D	A	K	I	A	D	A	G	K	I	L	S	R	M	C	F	E	A	N	A	.	.	.	.	.	.	.	.	.	.	D	W	V	T	V	I	.	.	.	.	C	C	A	D	I	N	T	A	K	G	A	L	D	V	A	K	E	F	N	G	D	V	Q
Query Conservation																																							.	.	.	.	.	.	.	.	.	.							.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.	.	.	.							.	.	.	.
Template Conservation
Template Sequence		K	I	I	S	L	A	R	S	T	G	Y	K	G	T	I	A	G	T	R	K	T	T	P	G	L	R	R	L	E	K	Y	S	M	L	V	G	G	C	D	T	H	R	Y	D	L	S	S	M	V	M	L	K	D	N	H	I	W	A	T	G	S	I	T	N	A	V	K	N	A	R	A	V	C	G	F	A	V	K	I	E
Template Known Secondary structure										T	T			S						S				T	T	T												T		B					S	T	T	S	S					S		S	T	T		S	S															T	T	S
Template Predicted Secondary structure
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	L	T	G	Y	W	T	W	E	Q	A	Q	Q	W	R	D	A	G	I	G	Q	V	V	Y	H	R	S	R	D	A	Q	A	A	G	V	A	W	G	E	A	D	I	T	A	I	K	R	L	S	D	M	G	F	K	V	T	V	T	G	G	L	A	L	E	D	L	P	L	F	K	G	I	P	I	H	V	F	I	A
Query Conservation
Alig confidence					.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Template Conservation					.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Template Sequence		V	E	C	.	.	.	L	S	E	D	E	A	T	E	A	I	E	A	G	A	D	V	I	M	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	H	F	L	L	E	C	S	G	G	L	N	L	D	N	L	.	.	Y	L	C	D	D	I	D	I	Y	S	T
Template Known Secondary structure					.	.	.		S											T		S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									S	S			T	T			.	.					S		S
Template Predicted Secondary structure					.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Template SS confidence
		205	.	.				.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.																										.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.			.	.	.	.	.	.	250	.	.	.	.
		191	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	S	I	R	D	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	S	I	H	Q	G	T	P
Template Known Secondary structure		G	G	G	T	T	T
Template Predicted Secondary structure
Template SS confidence
		278	.	280	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions