Return to main results Retrieve Phyre Job Id

Job DescriptionP39304
Confidence82.33%DateThu Jan 5 11:59:08 GMT 2012
Rank409Aligned Residues99
% Identity10%Templatec3bsmD_
PDB info PDB header:lyaseChain: D: PDB Molecule:mandelate racemase/muconate lactonizing enzyme; PDBTitle: crystal structure of d-mannonate dehydratase from2 chromohalobacter salexigens
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20....... ..30.........40.........50.........60.........70.........80 ........ .
Predicted Secondary structure 


.














.


..
Query SS confidence 













.




















































.







. .
Query Sequence  TMDSAYETTRLIAE. EVDIIEVGTILCVGEGVRAVRDLKALYPHKIVLADAKIADAGKILSRMCFEAN. ADWVTVIC. . C
Query Conservation    
  
        . 

 



       
   
  
        
  
 
  
            
.

 
 
  .. 
Alig confidence 













.





...


















.













..







.







..
Template Conservation      
      
       

...

           
     .



 

       ..    
     
 
  
    
Template Sequence  TPIEAARLGKAVEPYHLFWLE. . . DCVPAENQESLRLIREHTT. TPLAIGEVFNSIHD. . CRELIQNQWIDYIRMPLTHG
Template Known Secondary structure 
TGGG

S...

S

SSGGGG

.S

TT

SGGG..TTT

S


TTTT
Template Predicted Secondary structure 



...








.






..









Template SS confidence 















































































   219220.........230......... 240.........250........ .260.........270.. .......280.........290..
 
   90.........100.........110........
Predicted Secondary structure 









Query SS confidence 




























Query Sequence  ADINTAKGALDVAKEFNGDVQIELTGYWT
Query Conservation   
 
 
          
    
       
Alig confidence 




























Template Conservation 


     
   
   

    
     
Template Sequence  GGITAMRRVADLASLYHVRTGFHGPTDLS
Template Known Secondary structure  TTT





TTS
Template Predicted Secondary structure 








Template SS confidence 




























   293......300.........310.........320.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions