Job Description P39304 Confidence 93.58% Date Thu Jan 5 11:59:08 GMT 2012 Rank 308 Aligned Residues 169 % Identity 16% Template c3bolB_ PDB info PDB header:transferase Chain: B: PDB Molecule:5-methyltetrahydrofolate s-homocysteine PDBTitle: cobalamin-dependent methionine synthase (1-566) from2 thermotoga maritima complexed with zn2+ Resolution 1.85 Å

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		14	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.				.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.			80	.	.	.	.	.	.	.
Predicted Secondary structure													.																															.	.	.																										.	.
Query SS confidence													.																															.	.	.																										.	.
Query Sequence		T	M	D	S	A	Y	E	T	T	R	L	.	I	A	E	E	V	D	I	I	E	V	G	T	I	L	C	V	G	E	G	V	R	A	V	R	D	L	K	A	L	Y	.	.	.	P	H	K	I	V	L	A	D	A	K	I	A	D	A	G	K	I	L	S	R	M	C	F	E	A	.	.	N	A	D	W	V	T	V	I
Query Conservation													.																															.	.	.																										.	.
Alig confidence													.																															.	.	.									.	.	.	.														.	.							.
Template Conservation																																																							.	.	.	.																						.
Template Sequence		N	E	E	I	V	I	K	E	A	K	T	Q	V	E	K	G	A	E	V	L	D	V	N	F	G	I	E	S	Q	I	D	V	R	Y	V	E	K	I	V	Q	T	L	P	Y	V	S	N	V	P	L	S	L	D	.	.	.	.	I	Q	N	V	D	L	T	E	R	A	L	R	A	Y	P	G	R	S	L	F	N	.	S
Template Known Secondary structure																T	T		S							S	S	G	G	G	S																T		S						.	.	.	.															S	S						.
Template Predicted Secondary structure																																																							.	.	.	.																						.
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390					.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.		.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.												.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.													.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.													.
Query Sequence		C	C	A	D	I	N	T	A	K	G	A	L	D	V	A	K	E	F	N	G	D	V	Q	I	E	L	T	G	Y	W	T	.	.	.	.	.	.	.	.	.	.	.	W	E	Q	A	Q	Q	W	R	D	A	G	I	.	G	Q	V	V	Y	H	R	S	R	D	A	Q	A	A	G	V	A	W	G	E	A	D	I	T	A
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.													.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.													.																			.
Template Conservation																																																																											.
Template Sequence		A	K	V	D	E	E	E	L	E	M	K	I	N	L	L	K	K	Y	G	G	T	L	I	V	L	L	M	G	K	D	V	P	K	S	F	E	E	R	K	E	Y	F	E	K	A	L	K	I	L	E	R	H	D	F	S	D	R	V	I	F	D	P	G	V	L	P	L	G	A	E	G	K	P	.	V	E	V	L	K	T
Template Known Secondary structure				S																							S		S	S	S				S																		T	T		T	T	S										G	G	G	T				.
Template Predicted Secondary structure																																																																											.
Template SS confidence
		413	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.		.	.	.	.	490	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.													.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	K	R	L	S	D	M	G	F	K	V	T	V	T	G	G	L	A	L	E	D	.	.	.	.	.	.	.	.	.	.	.	.	L	P	L	F	K	G	I	P	I	H	V	F	I	A
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.
Template Sequence		I	E	F	I	S	S	K	G	F	N	T	T	V	.	.	G	L	S	N	L	S	F	L	P	D	R	S	Y	Y	N	T	A	F	L	V	L	G	I	S	K	G	L	S	S	A	I	M
Template Known Secondary structure								T	T			B			.	.	B	G	G	G	T	T				S															T	T
Template Predicted Secondary structure															.	.
Template SS confidence
		492	.	.	.	.	.	.	.	500	.	.	.	.			.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions