Job Description P39304 Confidence 97.80% Date Thu Jan 5 11:59:08 GMT 2012 Rank 178 Aligned Residues 170 % Identity 11% Template c3bleA_ PDB info PDB header:transferase Chain: A: PDB Molecule:citramalate synthase from leptospira interrogans; PDBTitle: crystal structure of the catalytic domain of licms in2 complexed with malonate Resolution 2.00 Å

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		14	.	.	.	.	.	20	.	.	.	.		.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.			.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.				.																																								.	.
Query SS confidence													.				.																																								.	.
Query Sequence		T	M	D	S	A	Y	E	T	T	R	L	.	I	A	E	.	E	V	D	I	I	E	V	G	T	I	L	C	V	G	E	G	V	R	A	V	R	D	L	K	A	L	Y	P	H	K	I	V	L	A	D	A	K	I	A	.	.	D	A	G	K	I	L	S	R	M	C	F	E	A	N	A	D	W	V	T	V	I	C	C
Query Conservation													.				.																																								.	.
Alig confidence													.				.																																								.	.
Template Conservation
Template Sequence		S	T	S	E	K	L	N	I	A	K	F	L	L	Q	K	L	N	V	D	R	V	E	I	A	S	A	R	V	S	K	G	E	L	E	T	V	Q	K	I	M	E	W	A	A	T	E	Q	L	T	E	R	I	E	I	L	G	F	V	D	G	N	K	T	V	D	W	I	K	D	S	G	A	K	V	L	N	L	L	T	K
Template Known Secondary structure																T	T			S							T	T	S		T	T															T	T		G	G	G							S	S	T	T										T
Template Predicted Secondary structure
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		90	.	.																.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.						.	.	.	.					120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.					.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.					.	.	.	.
Query Sequence		A	D	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	T	A	K	G	A	L	D	V	A	K	E	F	N	G	D	V	Q	I	E	L	T	G	.	.	.	.	.	Y	W	T	W	.	.	.	.	E	Q	A	Q	Q	W	R	D	A	G	I	G	Q	V	V	Y	H	R	S	R	D	A	Q	A	A	G
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.					.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.					.	.	.	.																	.	.	.	.	.
Template Conservation																																																																								.	.	.	.	.
Template Sequence		G	S	L	H	H	L	E	K	Q	L	G	K	T	P	K	E	F	F	T	D	V	S	F	V	I	E	Y	A	I	K	S	G	L	K	I	N	V	Y	L	E	D	W	S	N	G	F	R	N	S	P	D	Y	V	K	S	L	V	E	H	L	S	K	E	H	I	E	R	I	F	L	.	.	.	.	.	P	D	T	L	G
Template Known Secondary structure			S								T																					T	T									T																					T	S			S					.	.	.	.	.			T	T
Template Predicted Secondary structure																																																																								.	.	.	.	.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.						.	.	.	180	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170							.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.
Query Sequence		V	A	W	G	E	A	D	I	T	A	I	K	R	L	S	D	M	G	F	K	V	T	V	T	G	.	.	.	.	.	.	G	L	A	L	E	D	L	P	L	F	K	G	I	P	I	H	V	F
Query Conservation																											.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.
Template Conservation
Template Sequence		V	L	S	P	E	E	T	F	Q	G	V	D	S	L	I	Q	K	Y	P	D	I	H	F	E	F	H	G	H	N	D	Y	D	L	S	V	A	N	S	L	Q	A	I	R	A	G	V	K	G	L
Template Known Secondary structure																				T	T	S							B		T	T	S												T	T		S
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions