Job Description P39304 Confidence 96.86% Date Thu Jan 5 11:59:08 GMT 2012 Rank 229 Aligned Residues 170 % Identity 14% Template c3bg5C_ PDB info PDB header:ligase Chain: C: PDB Molecule:pyruvate carboxylase; PDBTitle: crystal structure of staphylococcus aureus pyruvate2 carboxylase Resolution 2.80 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.							.	.	.	.	.					40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.											.	.	70	.	.
Predicted Secondary structure																.								.	.	.	.	.	.						.	.	.	.																													.	.	.	.	.	.	.	.	.	.
Query SS confidence																.								.	.	.	.	.	.						.	.	.	.																													.	.	.	.	.	.	.	.	.	.
Query Sequence		T	M	D	S	A	Y	E	T	T	R	L	I	A	E	.	E	V	D	I	I	E	V	.	.	.	.	.	.	G	T	I	L	C	.	.	.	.	V	G	E	G	V	R	A	V	R	D	L	K	A	L	Y	P	H	K	I	V	L	A	D	A	K	I	A	D	.	.	.	.	.	.	.	.	.	.	A	G	K	I	L
Query Conservation																.								.	.	.	.	.	.						.	.	.	.																													.	.	.	.	.	.	.	.	.	.
Alig confidence																.								.	.	.	.	.	.						.	.	.	.																													.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	T	K	D	M	I	N	I	A	S	K	T	A	D	V	F	K	D	G	F	S	L	E	M	W	G	G	A	T	F	D	V	A	Y	N	F	L	K	E	N	P	W	E	R	L	E	R	L	R	K	A	I	P	N	V	L	F	Q	M	L	L	R	A	S	N	A	V	G	Y	K	N	Y	P	D	N	V	I	H	K	F
Template Known Secondary structure									T								T	T	T	S	S							T	T								T	S																	S	S							B	G	G	G	B	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		583	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.												.	.	.	.	.	.	120					.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																					.																							.	.	.	.	.	.	.	.	.	.	.								.	.	.	.
Query SS confidence																					.																							.	.	.	.	.	.	.	.	.	.	.								.	.	.	.
Query Sequence		S	R	M	C	F	E	A	N	A	D	W	V	T	V	I	C	C	A	D	.	I	N	T	A	K	G	A	L	D	V	A	K	E	F	N	G	D	V	Q	I	E	L	.	.	.	.	.	.	.	.	.	.	.	T	G	Y	W	T	W	E	.	.	.	.	Q	A	Q	Q	W	R	D	A	G	I	G	Q	V	V	Y	H
Query Conservation																					.																							.	.	.	.	.	.	.	.	.	.	.								.	.	.	.
Alig confidence																					.																							.	.	.	.	.	.	.	.	.	.	.								.	.	.	.																.
Template Conservation																																																																																	.
Template Sequence		V	Q	E	S	A	K	A	G	I	D	V	F	R	I	F	D	S	L	N	W	V	D	Q	M	K	V	A	N	E	A	V	Q	E	A	G	K	I	S	E	G	T	I	C	Y	T	G	D	I	L	N	P	E	R	S	N	I	Y	T	L	E	Y	Y	V	K	L	A	K	E	L	E	R	E	G	F	H	I	L	A	I	.
Template Known Secondary structure									T									T	T			G	G	G	G										T	T											S		T	T		T	T	T		S	S	S															T	T		S					.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		663	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.					.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.								.	.	.	.
Query SS confidence																											.								.	.	.	.
Query Sequence		R	S	R	D	A	Q	A	A	G	V	A	W	G	E	A	D	I	T	A	I	K	R	L	S	D	.	M	G	F	K	V	T	V	.	.	.	.	T	G	G	L	A	L	E	D	L	P	L	F	K	G	I	P	I	H	V	F
Query Conservation																											.								.	.	.	.
Alig confidence		.	.	.	.																						.								.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	K	D	M	A	G	L	L	K	P	K	A	A	Y	E	L	I	G	E	L	K	S	A	V	D	L	P	I	H	L	H	T	H	D	T	S	G	N	G	L	L	T	Y	K	Q	A	I	D	A	G	V	D	I	I
Template Known Secondary structure		.	.	.	.			T	T	S																T	T			S									T	T	S												T	T
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						741	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions