Job Description P39304 Confidence 98.61% Date Thu Jan 5 11:59:08 GMT 2012 Rank 105 Aligned Residues 161 % Identity 12% Template c2zbtB_ PDB info PDB header:lyase Chain: B: PDB Molecule:pyridoxal biosynthesis lyase pdxs; PDBTitle: crystal structure of pyridoxine biosynthesis protein from thermus2 thermophilus hb8 Resolution 1.65 Å

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		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	A	V	R	D	L	K	A	L	Y	P	H	K	I	V	L	A	D	A	K	I	A	D	A	G	K	I	L	S	R	M	C	F	E	A	N	A	D	W	V	T	V	I	C	C	A	D	I	N	T	A	K	G	A	L	D	V	A	K	E	F	N	G	D	V	Q	I	E	L	T	G	Y	W	T	W	E	Q	A	Q
Query Conservation
Alig confidence														.	.	.																																												.												.	.	.
Template Conservation														.	.	.																																												.												.	.	.
Template Sequence		P	K	I	I	K	E	I	M	A	A	V	S	.	.	.	I	P	V	M	A	K	V	R	I	G	H	F	V	E	A	M	I	L	E	A	I	G	V	D	F	I	D	E	S	E	V	L	T	P	A	D	E	E	H	H	I	D	K	.	W	K	F	K	V	P	F	V	C	G	A	.	.	.	R	N	L	G	E	A	L
Template Known Secondary structure													S	.	.	.	S								T	T											T	T		S						T	T	S			S		S	S					G	.	G	G		S	S							.	.	.	S	S
Template Predicted Secondary structure														.	.	.																																												.												.	.	.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.				.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.				.	.	.	.	.	.	.
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.																															.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.
Query Sequence		Q	W	R	D	A	G	I	G	Q	V	V	Y	H	R	S	R	D	A	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	G	V	A	W	G	E	A	D	I	T	A	I	K	R	L	S	D	M	G	F	K	V	T	V	T	G	G	L	.
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.
Template Conservation
Template Sequence		R	R	I	A	E	G	A	A	M	I	R	T	K	G	E	A	G	T	G	N	V	V	E	A	V	R	H	A	R	T	M	W	K	E	I	R	Y	V	Q	S	L	R	E	D	E	L	M	A	Y	A	K	E	I	G	A	P	F	E	L	V	K	W	V	H	D	H	G	R	L	P	V	V	N	F	A	A	G	G	I	A
Template Known Secondary structure						T	T		S								S	S	S			T																				S		G	G	G									T													S	S		S	S				B		S	S
Template Predicted Secondary structure
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	E	D	L	P	L	F	K	G	I	P	I	H	V	F	I	A	G	R	S	I	R	D	A	A	S	P	V	E	A	A	R	Q	F	K	R	S	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	P	A	D	A	A	L	M	M	H	L	G	M	D	G	V	F	V	G	S	G	I	F	K	S	G	D	P	R	K	R	A	R	A	I	V	R	A	V
Template Known Secondary structure		S										T	T		S						G	G	G	G	G	S	S
Template Predicted Secondary structure
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions