Job Description P39304 Confidence 99.11% Date Thu Jan 5 11:59:08 GMT 2012 Rank 87 Aligned Residues 200 % Identity 18% Template c2y85D_ PDB info PDB header:isomerase Chain: D: PDB Molecule:phosphoribosyl isomerase a; PDBTitle: crystal structure of mycobacterium tuberculosis phosphoribosyl2 isomerase with bound rcdrp Resolution 2.40 Å

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		1	.	.	.	.	.	.	.	.	10	.	.												.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	S	L	P	M	L	Q	V	A	L	D	N	.	.	.	.	.	.	.	.	.	.	.	Q	T	M	D	S	A	Y	E	T	T	R	L	I	A	E	E	V	D	I	I	E	V	G	T	I	L	C	V	G	E	G	V	R	A	V	R	D	L	K	A	L	Y	P	H	K	I	V	L	A	D	A	K	I	A	D	A	G
Query Conservation														.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.						.	.	.	.	.	.	.	.	.	.	.																																											.
Template Conservation								.																																																											.
Template Sequence		M	P	L	I	L	L	.	P	A	V	D	V	V	E	G	R	A	V	R	L	E	Y	G	S	A	V	D	A	A	L	G	W	Q	R	D	G	A	E	W	I	H	L	V	D	L	D	A	A	F	G	R	G	S	N	H	E	L	L	A	E	V	V	G	K	L	.	D	V	Q	V	E	L	S	G	G	I	R	D	D	E
Template Known Secondary structure								.							T	T																				T	T		S												T	S															.	S	S						S	S			S
Template Predicted Secondary structure								.																																																											.
Template SS confidence
		2	.	.	.	.	.		.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.																			.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	I	L	S	R	M	C	F	E	A	N	A	D	W	V	T	V	I	C	C	A	D	I	N	T	A	K	G	A	L	D	V	A	K	E	F	N	G	D	V	Q	I	E	L	T	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	T	W	E	Q	A	Q	Q	W	R	D	A	G	I	G
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.																							.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.																							.
Template Sequence		S	.	.	L	A	A	A	L	A	T	G	C	A	R	V	N	V	G	T	A	A	L	E	N	P	.	Q	W	C	A	R	V	I	G	E	H	G	D	Q	V	A	V	G	L	D	V	Q	I	I	D	G	E	H	R	L	R	G	R	G	W	E	T	D	G	G	D	L	W	D	V	L	E	R	L	D	S	E	G	C	S
Template Known Secondary structure			.	.							T	T		S						G	G	G	G	G			.											G	G	G											T	T							S	S		S	S															T	T
Template Predicted Secondary structure			.	.																							.
Template SS confidence
		89			90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.				.	.	.	.	.	.	190	.	.	.	.	.	.	.	.		.	200	.	.	.	.	.	.
Predicted Secondary structure																																											.												.	.	.																.
Query SS confidence																																											.												.	.	.																.
Query Sequence		Q	V	V	Y	H	R	S	R	D	A	Q	A	A	G	V	A	W	G	E	A	D	I	T	A	I	K	R	L	S	D	M	G	F	K	V	T	V	T	G	G	L	.	A	L	E	D	L	P	L	F	K	G	I	.	.	.	P	I	H	V	F	I	A	G	R	S	I	R	D	A	A	.	S	P	V	E	A	A	R	Q
Query Conservation																																											.												.	.	.																.
Alig confidence						.																											.	.									.												.	.	.																.
Template Conservation						.																											.	.
Template Sequence		R	F	V	V	.	T	D	I	T	K	D	G	T	L	G	G	P	N	L	D	L	L	A	G	V	A	D	R	T	D	A	.	.	P	V	I	A	S	G	G	V	S	S	L	D	D	L	R	A	I	A	T	L	T	H	R	G	V	E	G	A	I	V	G	K	A	L	Y	A	R	R	F	T	L	P	Q	A	L	A	A
Template Known Secondary structure						.			T	T	T	T	T	S	S	S												T	T		S	S	.	.						S				S									T	T	G	G	G	T												T	T	S	S
Template Predicted Secondary structure						.																											.	.
Template SS confidence
		166	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.			.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		207	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	R
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		243	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions