Job Description P39304 Confidence 84.84% Date Thu Jan 5 11:59:08 GMT 2012 Rank 385 Aligned Residues 185 % Identity 19% Template c2y5sA_ PDB info PDB header:transferase Chain: A: PDB Molecule:dihydropteroate synthase; PDBTitle: crystal structure of burkholderia cenocepacia dihydropteroate2 synthase complexed with 7,8-dihydropteroate. Resolution 1.95 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.													.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																							.																				.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.																				.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	L	Q	V	A	L	D	N	Q	T	M	D	S	A	Y	E	T	T	R	L	I	.	A	E	E	V	D	I	I	E	V	G	T	I	L	C	V	G	E	G	V	.	.	.	.	.	.	.	.	.	.	.	.	R	A	V	R	D	L	K	A	L	Y	P	H	K	I	V	L	A	D	A	K	I	A	D	A	G	K	I
Query Conservation																							.																				.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.											.																				.	.	.	.	.	.	.	.	.	.	.	.										.	.											.	.	.	.
Template Conservation										.	.	.																																																				.	.											.	.	.	.
Template Sequence		I	L	N	A	T	P	A	R	.	.	.	D	D	A	L	R	R	A	E	R	M	I	A	E	G	A	D	L	L	D	I	G	G	E	S	T	R	P	G	A	P	P	V	P	L	D	E	E	L	A	R	V	I	P	L	V	E	A	L	R	P	L	.	.	N	V	P	L	S	I	D	T	Y	K	.	.	.	.	P	A
Template Known Secondary structure									T	.	.	.	T												T	T		S						S	S			S	T	T																					G	G	G	.	.		S									.	.	.	.
Template Predicted Secondary structure										.	.	.																																																				.	.											.	.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.				.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.			.	.	.	.	.	90	.	.	.	.					.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.																						.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	S	R	M	C	F	E	A	N	A	D	W	V	T	V	I	C	C	A	D	I	N	T	A	K	G	A	L	D	V	A	K	E	F	N	G	D	V	Q	I	E	L	T	G	Y	W	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	E	Q	A	Q	Q	W	R	D	A	G	I
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.							.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.							.
Template Sequence		V	M	R	A	A	L	A	A	G	A	D	L	I	N	.	.	D	I	W	G	F	R	.	Q	P	G	A	I	D	A	V	R	D	G	N	S	G	L	C	A	M	H	M	L	G	E	P	Q	T	M	Q	V	G	E	P	D	Y	G	D	V	V	T	D	V	R	D	F	L	A	A	R	A	Q	A	L	R	D	A	G	V
Template Known Secondary structure										T		S				.	.		T	T	T	T		.	S	T	T						S	S	S	S												T	T	T	T								S	S																			T	T
Template Predicted Secondary structure																.	.							.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120			.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
				131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.						.	.	.	.	.	.	.												170	.	.	.	.	.	.									.	.	.	180	.	.	.	.
Predicted Secondary structure		.	.																																	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.
Query SS confidence		.	.																																	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.
Query Sequence		.	.	G	Q	V	V	Y	H	R	S	R	D	A	Q	A	A	G	V	A	W	G	E	A	D	I	T	A	I	K	R	L	S	D	M	.	.	.	.	.	G	F	K	V	T	V	T	.	.	.	.	.	.	.	.	.	.	.	G	G	L	A	L	E	D	.	.	.	.	.	.	.	.	L	P	L	F	K	G	I	P
Query Conservation		.	.																																	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.
Alig confidence		.	.																																	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	A	E	R	I	C	V	D	P	G	F	G	F	G	K	A	V	V	D	D	N	Y	A	L	L	A	A	L	P	D	T	A	P	A	R	P	D	G	R	A	Y	P	I	L	A	G	M	S	R	K	S	M	L	G	A	V	I	G	G	K	P	P	L	E	R	V	A	A	S	V	A	A	A	L	C	A	V	E	R	G
Template Known Secondary structure			G	G	G							T	T	S	S	S		T	T									T	G	G	G	G	S		B		T	T	S	S	B			B					T	T						T	T	T	T	S			G	G	G															T	T
Template Predicted Secondary structure
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	H	V	F	I	A	G	R	S	I	R	D	A	A	S	P	V	E	A	A	R	Q	F	K
Query Conservation
Alig confidence									.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.
Template Sequence		A	A	I	V	R	V	H	.	.	.	.	.	.	.	D	V	A	A	T	V	D	A	L	S
Template Known Secondary structure			S					S	.	.	.	.	.	.	.
Template Predicted Secondary structure									.	.	.	.	.	.	.
Template SS confidence
		264	.	.	.	.	.	270								.	.	.	.	.	.	.	.	.	280

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions