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Job Description | P39304 | Confidence | 79.48% | Date | Thu Jan 5 11:59:08 GMT 2012 |
Rank | 423 | Aligned Residues | 101 |
% Identity | 10% | Template | c2y0fD_ |
PDB info |
PDB header:oxidoreductase | Chain: D: PDB Molecule:4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; |
PDBTitle: structure of gcpe (ispg) from thermus thermophilus hb27
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Resolution | 2.50 Å |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
D | N | Q | T | M | D | S | A | Y | E | T | T | R | L | I | . |
A | E | E | V | D | I | I | E | V | G | T | I | L | C | . |
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V | G | E | G | V | R | A | V | R | D | L | K | A | L | Y | P | H | K | I | V | L | A | D | A | K | I | A | D | A | G | K | I | L | S | R | M | C | F | E | A | N | A | D | W | V | T | V | I |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
P | T | R | D | V | E | A | T | T | A | Q | V | L | E | L | H | R | A | G | S | E | I | V | R | L | T | V | N | D | E | E | A | A | K | A | V | P | E | I | K | R | R | L | L | A | E | G | V | E | V | P | L | V | G | D | F | H | F | N | G | H | L | L | L | R | K | Y | P | K | M | A | E | A | L | D | K | F | R | I | . |
Template Known Secondary structure |   |
| T | T |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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33 | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | |
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88 | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
C | C | A | D | I | N | T | A | K | G | A | L | D | V | A | K | E | F | N | G | D | V | Q | I | E | L | T | G |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
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N | P | E | H | F | A | E | M | I | R | I | A | M | D | L | G | K | P | V | R | I | G | A | N | W |
Template Known Secondary structure |   |
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| T | T |  |  |  |  |  |  |  |  | T | T | T |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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112 | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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