Job Description P39304 Confidence 96.62% Date Thu Jan 5 11:59:08 GMT 2012 Rank 240 Aligned Residues 193 % Identity 11% Template c2qygC_ PDB info PDB header:unknown function Chain: C: PDB Molecule:ribulose bisphosphate carboxylase-like protein 2; PDBTitle: crystal structure of a rubisco-like protein rlp2 from rhodopseudomonas2 palustris Resolution 3.30 Å

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		14	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.											40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.			.	.	.	.	.	.	.	80
Predicted Secondary structure														.															.	.	.	.	.	.	.	.	.	.																																		.	.
Query SS confidence														.															.	.	.	.	.	.	.	.	.	.																																		.	.
Query Sequence		T	M	D	S	A	Y	E	T	T	R	L	I	.	A	E	E	V	D	I	I	E	V	G	T	I	L	C	.	.	.	.	.	.	.	.	.	.	V	G	E	G	V	R	A	V	R	D	L	K	A	L	Y	P	H	K	I	V	L	A	D	A	K	I	A	D	A	G	K	I	L	.	.	S	R	M	C	F	E	A	N
Query Conservation														.															.	.	.	.	.	.	.	.	.	.																																		.	.
Alig confidence														.															.	.	.	.	.	.	.	.	.	.																																		.	.
Template Conservation
Template Sequence		P	P	Q	P	F	A	E	L	G	Y	Q	S	W	T	G	G	L	D	I	A	K	D	D	E	M	L	A	D	V	D	W	C	P	L	A	E	R	A	A	L	L	G	D	A	C	R	R	A	S	A	E	T	G	V	P	K	I	Y	L	A	N	I	T	D	E	V	D	R	L	T	E	L	H	D	V	A	V	A	N	G
Template Known Secondary structure			S														T		S						T	T			S		T	T	S																					S	S												T	T												T	T
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120											.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure												.																															.	.	.	.	.	.	.	.	.	.								.
Query SS confidence												.																															.	.	.	.	.	.	.	.	.	.								.
Query Sequence		A	D	W	V	T	V	I	C	C	A	.	D	I	N	T	A	K	G	A	L	D	V	A	K	E	F	N	G	D	V	Q	I	E	L	T	G	Y	W	T	W	E	.	.	.	.	.	.	.	.	.	.	Q	A	Q	Q	W	R	D	.	A	G	I	G	Q	V	V	Y	H	R	S	R	D	A	Q	A	A	G	V	A	W
Query Conservation												.																															.	.	.	.	.	.	.	.	.	.								.
Alig confidence												.									.	.	.																				.	.	.	.	.	.	.	.	.	.								.										.	.	.
Template Conservation																					.	.	.																																															.	.	.
Template Sequence		A	G	A	L	L	I	N	A	M	P	V	G	L	S	A	V	R	M	L	.	.	.	R	K	H	A	T	V	P	L	I	A	H	F	P	F	I	A	A	F	S	R	L	A	N	Y	G	I	H	S	R	V	M	T	R	L	Q	R	L	A	G	F	D	V	V	I	M	P	.	.	.	G	F	G	P	R	M	M	T	P
Template Known Secondary structure																					.	.	.		T	T			S							T	T						S		T	T	S															T		S						.	.	.		S	S	G	G	G
Template Predicted Secondary structure																					.	.	.																																															.	.	.
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.				.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.				.	.	.	.	.	.	.	330	.
		149	150	.	.	.	.	.	.	.	.	.	160	.						.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.		.	.	.	.	.		190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure															.	.	.	.	.																							.		.						.											.
Query SS confidence															.	.	.	.	.																							.		.						.											.
Query Sequence		G	E	A	D	I	T	A	I	K	R	L	S	D	.	.	.	.	.	M	G	F	K	V	T	V	T	G	G	L	A	L	E	D	L	P	L	F	K	G	I	.	P	.	I	H	V	F	I	.	A	G	R	S	I	R	D	A	A	S	.	P	V	E	A	A	R	Q	F	K	R	S	I	A
Query Conservation															.	.	.	.	.																							.		.						.											.
Alig confidence															.	.	.	.	.																							.		.						.											.
Template Conservation
Template Sequence		E	H	E	V	L	D	C	I	R	A	C	L	E	P	M	G	P	I	K	P	C	L	P	V	P	G	G	S	D	S	A	A	T	L	E	N	V	Y	R	K	V	G	S	A	D	F	G	F	V	P	G	R	G	V	F	G	H	P	M	G	P	A	A	G	A	T	S	I	R	Q	A	W	D
Template Known Secondary structure														S		B	T	T	B									S	S			T	T	T										S	S							S	T	T	T	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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