Job Description P39304 Confidence 96.75% Date Thu Jan 5 11:59:08 GMT 2012 Rank 235 Aligned Residues 133 % Identity 12% Template c2jgqB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:triosephosphate isomerase; PDBTitle: kinetics and structural properties of triosephosphate2 isomerase from helicobacter pylori Resolution 2.3 Å

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		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.								90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	D	A	G	K	I	L	S	R	M	C	F	E	A	N	A	D	W	V	T	V	I	C	C	.	.	.	.	.	.	.	A	D	I	N	T	A	K	G	A	L	D	V	A	K	E	F	N	G	D	V	Q	I	E	L	T	G	Y	W	T	W	E	Q	A	Q	Q	W	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																										.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.																							.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																							.
Template Sequence		A	F	T	G	E	I	T	S	K	H	L	E	E	L	K	I	H	T	L	L	I	G	H	S	E	R	R	T	L	L	K	E	S	P	S	F	L	K	E	K	F	D	F	F	K	S	K	N	F	K	I	V	Y	.	C	I	G	E	E	L	T	T	R	E	K	G	F	K	A	V	K	E	F	L	S	E	Q	L	E	N
Template Known Secondary structure		S		T	T			B							T	T														T	S																	T	T						.																									T	T
Template Predicted Secondary structure																																																							.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
				126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.																								.																																			.
Query SS confidence		.	.																								.																																			.
Query Sequence		.	.	R	D	A	G	I	G	Q	V	V	Y	H	R	S	R	D	A	Q	A	A	G	V	A	W	.	G	E	A	D	I	T	A	I	K	R	L	S	D	M	G	F	K	V	T	V	T	G	G	L	A	L	E	D	L	P	L	F	K	G	.	I	P	I	H	V	F	I	A	G	R	S	I	R	D	A	A	S
Query Conservation		.	.																								.																																			.
Alig confidence		.	.																								.																																			.
Template Conservation
Template Sequence		I	D	L	N	Y	P	N	L	V	V	A	Y	E	P	I	W	A	I	G	T	S	A	S	L	E	D	I	Y	L	T	H	G	F	L	K	Q	I	L	N	Q	K	T	P	L	L	Y	G	G	S	V	N	T	Q	N	A	K	E	I	L	G	I	D	S	V	D	G	L	L	I	G	S	A	S	W	E	L	E	N
Template Known Secondary structure		S		T	T		T	T								G	G	G	T	T																T	T	T	S		T	T	S						S	S			T	T	T						T	S	T	T								G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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