Job Description P39304 Confidence 70.54% Date Thu Jan 5 11:59:08 GMT 2012 Rank 476 Aligned Residues 149 % Identity 16% Template c2dy3B_ PDB info PDB header:isomerase Chain: B: PDB Molecule:alanine racemase; PDBTitle: crystal structure of alanine racemase from corynebacterium glutamicum Resolution 2.10 Å

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		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.				.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure																				.	.	.
Query SS confidence																				.	.	.
Query Sequence		V	R	D	L	K	A	L	Y	P	H	K	I	V	L	A	D	A	K	.	.	.	I	A	D	A	G	K	I	L	S	R	M	C	F	E	A	N	A	D	W	V	T	V	I	C	C	A	D	I	N	T	A	K	G	A	L	D	V	A	K	E	F	N	G	D	V	Q	I	E	L	T	G	Y	W	T	W	E	Q	A	Q
Query Conservation																				.	.	.
Alig confidence																				.	.	.																									.	.	.	.	.	.								.
Template Conservation																																															.	.	.	.	.	.								.
Template Sequence		T	R	V	L	K	Q	M	A	G	P	A	K	L	M	A	V	V	K	A	N	A	Y	N	H	G	V	E	K	V	A	P	V	I	A	A	H	G	A	D	A	F	G	V	A	T	.	.	.	.	.	.	L	A	E	A	M	Q	L	.	R	D	I	G	I	S	Q	E	V	L	C	W	I	W	T	P	E	Q	D	F	R
Template Known Secondary structure										T	T	S												T	T											T	T	T									.	.	.	.	.	.								.			T	T			S									T	T	S
Template Predicted Secondary structure																																															.	.	.	.	.	.								.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.							.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.								170	.	.	.	.	.	.	.	.	.	180	.	.	.						.	.	.	.	.	.	190	.
Predicted Secondary structure																																																.	.	.	.	.	.	.															.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.															.	.	.	.	.
Query Sequence		Q	W	R	D	A	G	I	G	Q	V	V	Y	H	R	S	R	D	A	Q	A	A	G	V	A	W	G	E	A	D	I	T	A	I	K	R	L	S	D	M	G	F	K	V	T	V	T	.	.	.	.	.	.	.	G	G	L	A	L	E	D	L	P	L	F	K	G	I	.	.	.	.	.	P	I	H	V	F	I	A	G
Query Conservation																																																.	.	.	.	.	.	.															.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.															.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	A	I	D	R	N	I	D	L	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	I	S	P	A	H	A	K	A	L	I	E	T	D	A	E	H	I	R	V	S	I	K	I	D	S	G	L	H	R	S	G	V	D	E	Q	E	W	E	G	V	F	S	A	L	A	A	A	P	H	I	E	V	T	G	M	F
Template Known Secondary structure					T	T	T						.	.	.	.	.	.	.	.	.	.	.	.	.		S									T				S								B			S	S		S	S	S	B																T	T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100														.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	I	R	D	A	A	S	P	V	E	A	A	R	Q	F	K	R	S	I	A	E	L	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	H	L	A	C	A	P	E	T	D	R	Q	I	I	A	F	R	R	A	L	A	L	A	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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