Job Description P39304 Confidence 63.62% Date Thu Jan 5 11:59:08 GMT 2012 Rank 500 Aligned Residues 124 % Identity 18% Template c2a4aB_ PDB info PDB header:lyase Chain: B: PDB Molecule:deoxyribose-phosphate aldolase; PDBTitle: deoxyribose-phosphate aldolase from p. yoelii Resolution 1.84 Å

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		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.											.	.	.	.	.	.	.	100	.	.	.				.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.					.	130	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.												.	.	.																										.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.												.	.	.																										.	.	.	.
Query Sequence		I	L	S	R	M	C	F	E	A	N	A	D	W	V	T	V	I	C	C	A	D	I	.	.	.	.	.	.	.	.	.	.	N	T	A	K	G	A	L	D	V	A	K	.	.	.	E	F	N	G	D	V	Q	I	E	L	T	G	Y	W	T	W	E	Q	A	Q	Q	W	R	D	A	.	.	.	.	G	I	G	Q	V
Query Conservation																								.	.	.	.	.	.	.	.	.	.												.	.	.																										.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.												.	.	.																										.	.	.	.
Template Conservation
Template Sequence		N	D	T	E	K	A	L	D	D	G	A	D	E	I	D	L	V	I	N	Y	K	K	I	I	E	N	T	D	E	G	L	K	E	A	T	K	L	T	Q	S	V	K	K	L	L	T	N	K	I	L	K	V	I	I	E	V	G	E	L	K	T	E	D	L	I	I	K	T	T	L	A	V	L	N	G	N	A	D	F	I
Template Known Secondary structure											T		S														S																			T	T	T	S													S													T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.							160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.					.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.																				.	.	.	.
Query SS confidence																												.	.	.	.	.	.																				.	.	.	.
Query Sequence		V	Y	H	R	S	R	D	A	Q	A	A	G	V	A	W	G	E	A	D	I	T	A	I	K	R	L	.	.	.	.	.	.	S	D	M	G	F	K	V	T	V	T	G	G	L	A	L	E	D	L	P	.	.	.	.	L	F	K	G	I	P	I	H	V	F	I	A	G	R	S	I
Query Conservation																												.	.	.	.	.	.																				.	.	.	.
Alig confidence																												.	.	.	.	.	.																				.	.	.	.
Template Conservation
Template Sequence		K	T	S	T	G	K	V	Q	I	N	A	T	P	S	S	V	E	Y	I	I	K	A	I	K	E	Y	I	K	N	N	P	E	K	N	N	K	I	G	L	K	V	S	G	G	I	S	D	L	N	T	A	S	H	Y	I	L	L	A	R	R	F	L	F	R	I	G	S	S	S	L	V
Template Known Secondary structure						S		S	S																							G	G	G	T	T	T							S	S			S																					S	S
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions