Job Description P39304 Confidence 88.19% Date Thu Jan 5 11:59:08 GMT 2012 Rank 360 Aligned Residues 168 % Identity 18% Template c1zlpA_ PDB info PDB header:lyase Chain: A: PDB Molecule:petal death protein; PDBTitle: petal death protein psr132 with cysteine-linked glutaraldehyde forming2 a thiohemiacetal adduct Resolution 2.70 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.					.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.															.	90	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	T	I	L	C	V	G	E	G	V	R	A	V	R	D	L	K	A	L	Y	P	H	K	I	V	L	A	D	A	K	I	A	D	A	.	.	.	.	G	K	I	L	S	R	M	C	F	E	A	N	A	D	W	V	T	V	I	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	A	D	I	N	T	A	K
Query Conservation																																				.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	G	L	L	T	T	T	E	V	V	E	A	T	R	R	I	T	A	A	A	P	N	L	C	V	V	V	D	G	D	T	G	G	G	G	P	L	N	V	Q	R	F	I	R	E	L	I	S	A	G	A	K	G	V	F	L	E	D	Q	V	W	P	K	K	C	G	H	M	R	G	K	A	V	V	P	A	E	E	H	A
Template Known Secondary structure		S	S		S																S	S	S	S							T	T		S	S	S														T	T									B		S	S				S	S	S	S				B
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		97	.	.	100	.	.	.	.	.			.	.	.	.	110	.	.	.	.	.	.									.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure											.	.												.	.	.	.	.	.	.	.
Query SS confidence											.	.												.	.	.	.	.	.	.	.
Query Sequence		G	A	L	D	V	A	K	E	F	.	.	N	G	D	V	Q	I	E	L	T	G	Y	.	.	.	.	.	.	.	.	W	T	W	E	Q	A	Q	Q	W	R	D	A	G	I	G	Q	V	V	Y	H	R	S	R	D	A	Q	A	A	G	V	A	W	G	E	A	D	I	T	A	I	K	R	L	S	D	M	G	F	K	V
Query Conservation											.	.												.	.	.	.	.	.	.	.
Alig confidence											.	.												.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.	.	.
Template Sequence		L	K	I	A	A	A	R	E	A	I	G	D	S	D	F	F	L	V	A	R	T	D	A	R	A	P	H	G	L	E	E	G	I	R	R	A	N	L	Y	K	E	A	G	A	D	A	T	F	V	E	.	.	.	.	.	.	.	.	A	P	A	N	V	D	E	L	K	E	V	S	A	K	T	K	G	L	R	I	A	N
Template Known Secondary structure												T	T	S										T																			T	T		S						.	.	.	.	.	.	.	.				S											S		S
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.									210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		167	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		T	V	T	G	G	L	A	L	E	.	D	L	P	L	F	K	G	I	P	I	H	V	F	I	A	G	R	S	I	R	D	A	A	S	P	V	E	A	A	R	Q	F	K	R	S	I	A	E	L	W
Query Conservation											.
Alig confidence											.																							.	.	.	.	.
Template Conservation																																		.	.	.	.	.
Template Sequence		M	I	E	G	G	K	T	P	L	H	T	P	E	E	F	K	E	M	G	F	H	L	I	A	H	S	L	T	A	V	Y	A	.	.	.	.	.	T	A	R	A	L	V	N	I	M	K	I	L	K
Template Known Secondary structure				T	T	S	S	S												T								S						.	.	.	.	.
Template Predicted Secondary structure																																		.	.	.	.	.
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.						.	.	.	.	.	.	270	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions