Job Description P39304 Confidence 83.48% Date Thu Jan 5 11:59:08 GMT 2012 Rank 397 Aligned Residues 184 % Identity 11% Template c1vs1B_ PDB info PDB header:transferase Chain: B: PDB Molecule:3-deoxy-7-phosphoheptulonate synthase; PDBTitle: crystal structure of 3-deoxy-d-arabino-heptulosonate-7-2 phosphate synthase (dahp synthase) from aeropyrum pernix3 in complex with mn2+ and pep Resolution 2.30 Å

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		2	.	.	.	.	.	.	.		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.							.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure										.																	.												.	.	.	.	.	.			.
Query SS confidence										.																	.												.	.	.	.	.	.			.
Query Sequence		S	L	P	M	L	Q	V	A	.	L	D	N	Q	T	M	D	S	A	Y	E	T	T	R	L	I	.	A	E	E	V	D	I	I	E	V	G	T	.	.	.	.	.	.	I	L	.	C	V	G	E	G	V	R	A	V	R	D	L	K	A	L	Y	P	H	K	I	V	L	A	D	A	K	I	A	D	A	G	K	I	L
Query Conservation										.																	.												.	.	.	.	.	.			.
Alig confidence										.																	.												.	.	.	.	.	.			.																																	.	.
Template Conservation																																																																																.	.
Template Sequence		G	S	K	A	V	I	A	G	P	C	S	V	E	S	W	E	Q	V	R	E	A	A	L	A	V	K	E	A	G	A	H	M	L	R	G	G	A	F	K	P	R	T	S	P	Y	S	F	Q	G	L	G	L	E	G	L	K	L	L	R	R	A	G	D	E	A	G	L	P	V	V	T	E	V	L	D	P	R	H	.	.
Template Known Secondary structure		T	B								S	B																		T		S					B	S	S				S	S	T	T	S					T															T										G	G	G	.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.						.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.
Query Sequence		S	R	M	C	F	E	A	N	A	D	W	V	T	V	I	C	C	A	D	I	N	T	A	K	G	A	L	D	V	A	K	E	F	N	G	D	V	Q	I	E	L	T	G	Y	W	T	W	E	Q	A	Q	Q	W	R	D	A	.	.	.	.	.	G	I	G	Q	V	V	Y	H	R	S	R	D	A	Q	A	A	G	V	A
Query Conservation																																																										.	.	.	.	.
Alig confidence									.															.	.																																	.	.	.	.	.
Template Conservation									.															.	.
Template Sequence		V	E	T	V	S	R	Y	.	A	D	M	L	Q	I	G	A	R	N	M	Q	N	F	.	.	P	L	L	R	E	V	G	R	S	G	K	P	V	L	L	K	R	G	F	G	N	T	V	E	E	L	L	A	A	A	E	Y	I	L	L	E	G	N	W	Q	V	V	L	V	E	R	G	I	R	T	F	E	P	S	T	R
Template Known Secondary structure									.		S						G	G	G	T	T			.	.																			T	T																T	T											B			S			S	S	S
Template Predicted Secondary structure									.															.	.
Template SS confidence
		115	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.			.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.					.	170	.	.	.	.	.	.				.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure																							.	.	.	.									.	.	.
Query SS confidence																							.	.	.	.									.	.	.
Query Sequence		W	G	E	A	D	I	T	A	I	K	R	L	S	D	M	G	F	K	V	T	V	.	.	.	.	T	G	G	L	A	L	E	D	.	.	.	L	P	L	F	K	G	I	P	I	H	V	F	I	A
Query Conservation																							.	.	.	.									.	.	.
Alig confidence																							.	.	.	.									.	.	.
Template Conservation
Template Sequence		F	T	L	D	V	A	A	V	A	V	L	K	E	A	T	H	L	P	V	I	V	D	P	S	H	P	A	G	R	R	S	L	V	P	A	L	A	K	A	G	L	A	A	G	A	D	G	L	I	V
Template Known Secondary structure		S	B													B	S	S												S	G	G	G											T	T		S
Template Predicted Secondary structure
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions