Job Description P39304 Confidence 96.98% Date Thu Jan 5 11:59:08 GMT 2012 Rank 220 Aligned Residues 193 % Identity 10% Template c1telA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:ribulose bisphosphate carboxylase, large subunit; PDBTitle: crystal structure of a rubisco-like protein from chlorobium2 tepidum Resolution 2.70 Å

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		14	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.											40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.			.	.	.	.	.	.	.	80
Predicted Secondary structure														.															.	.	.	.	.	.	.	.	.	.																																		.	.
Query SS confidence														.															.	.	.	.	.	.	.	.	.	.																																		.	.
Query Sequence		T	M	D	S	A	Y	E	T	T	R	L	I	.	A	E	E	V	D	I	I	E	V	G	T	I	L	C	.	.	.	.	.	.	.	.	.	.	V	G	E	G	V	R	A	V	R	D	L	K	A	L	Y	P	H	K	I	V	L	A	D	A	K	I	A	D	A	G	K	I	L	.	.	S	R	M	C	F	E	A	N
Query Conservation														.															.	.	.	.	.	.	.	.	.	.																																		.	.
Alig confidence														.															.	.	.	.	.	.	.	.	.	.																																		.	.
Template Conservation
Template Sequence		S	P	G	E	F	A	E	I	A	Y	Q	S	W	L	G	G	L	D	I	A	K	D	D	E	M	L	A	D	V	T	W	S	S	I	E	E	R	A	A	H	L	G	K	A	R	R	K	A	E	A	E	T	G	E	P	K	I	Y	L	A	N	I	T	D	E	V	D	S	L	M	E	K	H	D	V	A	V	R	N	G
Template Known Secondary structure																	T		S						T	T		S	S	B	T	T	B																					S	S												G	G	G												T
Template Predicted Secondary structure
Template SS confidence
		1178	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.												.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure												.																																			.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.																																			.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	D	W	V	T	V	I	C	C	A	.	D	I	N	T	A	K	G	A	L	D	V	A	K	E	F	N	G	D	V	Q	I	E	L	T	G	Y	W	T	W	E	Q	A	Q	Q	.	.	.	.	.	.	.	.	.	.	.	W	R	D	A	G	I	G	Q	V	V	Y	H	R	S	R	D	A	Q	A	A	G	V	A	W
Query Conservation												.																																			.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.									.	.	.																								.	.	.	.	.	.	.	.	.	.	.													.	.	.
Template Conservation																					.	.	.																																															.	.	.
Template Sequence		A	N	A	L	L	I	N	A	L	P	V	G	L	S	A	V	R	M	L	.	.	.	S	N	Y	T	Q	V	P	L	I	G	H	F	P	F	I	A	S	F	S	R	M	E	K	Y	G	I	H	S	K	V	M	T	K	L	Q	R	L	A	G	L	D	A	V	I	M	P	.	.	.	G	F	G	D	R	M	M	T	P
Template Known Secondary structure																					.	.	.		T	T		S	S							T	T	T						S	T	T	S															T		S						.	.	.		S	S	S	S	S
Template Predicted Secondary structure																					.	.	.																																															.	.	.
Template SS confidence
		1258	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.				.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.				.	.	.	.	.	.	.	1330	.
		149	150	.	.	.	.	.	.	.	.	.	160	.						.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.		.	.	.	.	.		190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure															.	.	.	.	.																							.		.						.											.
Query SS confidence															.	.	.	.	.																							.		.						.											.
Query Sequence		G	E	A	D	I	T	A	I	K	R	L	S	D	.	.	.	.	.	M	G	F	K	V	T	V	T	G	G	L	A	L	E	D	L	P	L	F	K	G	I	.	P	.	I	H	V	F	I	.	A	G	R	S	I	R	D	A	A	S	.	P	V	E	A	A	R	Q	F	K	R	S	I	A
Query Conservation															.	.	.	.	.																							.		.						.											.
Alig confidence															.	.	.	.	.																							.		.						.											.
Template Conservation
Template Sequence		E	E	E	V	L	E	N	V	I	E	C	T	K	P	M	G	R	I	K	P	C	L	P	V	P	G	G	S	D	S	A	L	T	L	Q	T	V	Y	E	K	V	G	N	V	D	F	G	F	V	P	G	R	G	V	F	G	H	P	M	G	P	K	A	G	A	K	S	I	R	Q	A	W	E
Template Known Secondary structure														S			T	T										S	S	B		T	T	T										S	S		S				B		S	S	S	S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		1332	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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