Job Description P39304 Confidence 97.82% Date Thu Jan 5 11:59:08 GMT 2012 Rank 173 Aligned Residues 172 % Identity 16% Template c1rr2A_ PDB info PDB header:transferase Chain: A: PDB Molecule:transcarboxylase 5s subunit; PDBTitle: propionibacterium shermanii transcarboxylase 5s subunit bound to 2-2 ketobutyric acid Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		12	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.									.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.											.	.	70	.	.
Predicted Secondary structure																.													.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.
Query SS confidence																.													.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.
Query Sequence		N	Q	T	M	D	S	A	Y	E	T	T	R	L	I	.	A	E	E	V	D	I	I	E	V	G	T	I	.	.	.	.	.	.	.	.	L	C	V	G	E	G	V	R	A	V	R	D	L	K	A	L	Y	P	H	K	I	V	L	A	D	A	K	I	A	D	.	.	.	.	.	.	.	.	.	.	A	G	K	I	L
Query Conservation																.													.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.
Alig confidence																.													.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	M	A	M	E	D	M	V	G	A	C	A	D	I	D	A	A	G	Y	W	S	V	E	C	W	G	G	A	T	Y	D	S	C	I	R	F	L	N	E	D	P	W	E	R	L	R	T	F	R	K	L	M	P	N	S	R	L	Q	M	L	L	R	G	Q	N	L	L	G	Y	R	H	Y	N	D	E	V	V	D	R	F
Template Known Secondary structure					G	G	G	T	G	G	G						T	S			S							T	T								T	S																T	T	S								G	G	G	T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.									.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																						.																											.	.	.	.	.	.	.	.
Query SS confidence																						.																											.	.	.	.	.	.	.	.
Query Sequence		S	R	M	C	F	E	A	N	A	D	W	V	T	V	I	C	C	A	D	I	.	N	T	A	K	G	A	L	D	V	A	K	E	F	N	G	D	V	Q	I	E	L	T	G	Y	W	T	.	.	.	.	.	.	.	.	W	E	Q	A	Q	Q	W	R	D	A	G	I	G	Q	V	V	Y	H	R	S	R	D	A	Q	A
Query Conservation																						.																											.	.	.	.	.	.	.	.
Alig confidence																						.																											.	.	.	.	.	.	.	.																		.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.
Template Sequence		V	D	K	S	A	E	N	G	M	D	V	F	R	V	F	D	A	M	N	D	P	R	N	M	A	H	A	M	A	A	V	K	K	A	G	K	H	A	Q	G	T	I	C	Y	T	I	S	P	V	H	T	V	E	G	Y	V	K	L	A	G	Q	L	L	D	M	G	A	D	S	I	A	L	.	.	.	.	.	K	D	M
Template Known Secondary structure								T	T									T	T			T													T	T													T	T																T	T		S					.	.	.	.	.			T
Template Predicted Secondary structure																																																																										.	.	.	.	.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.						.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.				.	.	.	.	.	.					.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.							.	.	.	.
Query SS confidence																					.	.	.							.	.	.	.
Query Sequence		A	G	V	A	W	G	E	A	D	I	T	A	I	K	R	L	S	D	M	.	.	.	G	F	K	V	T	V	.	.	.	.	T	G	G	L	A	L	E	D	L	P	L	F	K	G	I	P	I	H	V	F
Query Conservation																					.	.	.							.	.	.	.
Alig confidence																					.	.	.							.	.	.	.
Template Conservation
Template Sequence		A	A	L	L	K	P	Q	P	A	Y	D	I	I	K	A	I	K	D	T	Y	G	Q	K	T	Q	I	N	L	H	C	H	S	T	T	G	V	T	E	V	S	L	M	K	A	I	E	A	G	V	D	V	V
Template Known Secondary structure		T																					T	T								B		T	T	S												T	T		S
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions