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Job DescriptionP39304
Confidence96.89%DateThu Jan 5 11:59:08 GMT 2012
Rank225Aligned Residues196
% Identity10%Templatec1rcxH_
PDB info PDB header:lyase (carbon-carbon)Chain: H: PDB Molecule:ribulose bisphosphate carboxylase/oxygenase; PDBTitle: non-activated spinach rubisco in complex with its substrate2 ribulose-1,5-bisphosphate
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20..... ....30......... 40.........50.........60.........70.. .......
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Query Sequence  TMDSAYETTRLI. AEEVDIIEVGTILC. . . . . . . . . . VGEGVRAVRDLKALYPHKIVLADAKIADAGKIL. . . SRMCFEA
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Template Sequence  SAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEALYKAQAETGEIKGHYLNATAGTCEDMMKRAVFAREL
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   181........190.........200.........210.........220.........230.........240.........250.........260
 
   80.........90 .........100.........110.........120 ....... ..130.........140.......
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Query Sequence  NADWVTVICCA. DINTAKGALDVAKEFNGDVQIELTGYWTWE. . . . . . . . . . QAQQWRD. AGIGQVVYHRSRDAQAAGVA
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Template Sequence  GVPIVMHDYLTGGFTANTTLSHYCRDNGLLLHIHRAMHAVIDRQKNHGMHFRVLAKALRLSGGDHI. . . HSGTVVGKLEG
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   261........270.........280.........290.........300.........310.........320...... ...330.......
 
   148.150.........160. ........170.........180... ......190 ......... 200....
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Query Sequence  WGEADITAIKRLSD. . . . . . . . . . . . . . . . . . . . MGFKVTVTGGLALEDLPLFKGI. PIHVFIA. GRSIRDAAS. PVEAA
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Template Sequence  ERDITLGFVDLLRDDYTEKDRSRGIYFTQSWVSTPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGA
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BGGGTB
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   338.340.........350.........360.........370.........380.........390.........400.........410.......
 
   205....210..
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Query Sequence  RQFKRSIA
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Template Sequence  VANRVALE
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   418.420.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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